DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment okr and Ino80

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_732413.1 Gene:Ino80 / 42314 FlyBaseID:FBgn0289122 Length:1638 Species:Drosophila melanogaster


Alignment Length:983 Identity:195/983 - (19%)
Similarity:334/983 - (33%) Gaps:384/983 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 QELEREQELDRRR-LGALRDASNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGK 98
            ::|.:..|.|:.| |..|.:.:|.       |..|..:|:....|:||::              .
  Fly   434 KKLGQGSEEDQLRILSQLDEETNA-------RLAAQDDYDAGEMKLLAQE--------------N 477

  Fly    99 RVLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREG 163
            ....::|.:.:....|..|..........|....|.:..:|...:..:....:....|:.:|.:|
  Fly   478 AEAAMQRDLDKTRAFDVFAKKKEKEEEEQAQESVEDIKPEPRPEMKDLPQPKMFKGTLKGYQIKG 542

  Fly   164 VRFM---YECVEGKRGNFNGCIMADEMGLGKTLQCVTL---------VWTLLRQGPECKPTINKA 216
            :.::   |:  :|..|     |:|||||||||:|.:..         ||     ||        .
  Fly   543 MTWLANIYD--QGISG-----ILADEMGLGKTVQSIAFLCHIAEHYGVW-----GP--------F 587

  Fly   217 IVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQF----SMTSARLGTPVLLISYE 277
            :|:||:|.:.||::|.::::.. ...:|..|...|..|  |.||    .:.:......|::.||:
  Fly   588 LVISPASTLHNWQQEMSRFVPD-FKVVPYWGSPAERKI--LRQFWDQKHLHTRDASFHVVITSYQ 649

  Fly   278 ----TFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYS 338
                .::.:..|..:|    ::.||...:|::.:..::.|:|...:.|:|||||||||.:.|.::
  Fly   650 LVVSDYKYFNRIKWQY----MVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWA 710

  Fly   339 LVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQ--ELIGLVDQCIIRRTNQIL 401
            |::|:.|.:..:...|...|...|       .:..|.:..|::.|  .|..::...::||..:.:
  Fly   711 LLHFIMPTLFDSHDEFNEWFSKDI-------ESHAENKTGIDEKQISRLHMILKPFMLRRIKKDV 768

  Fly   402 TKYLPVKFEMVICAKLTAIQLELYT---------------------------------------- 426
            ...|..|.|:::...||..|..||.                                        
  Fly   769 ENELSDKIEIMVYCPLTIRQKLLYRALKQKIRIEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKV 833

  Fly   427 --------------------------------------------------NFLKSDQVRRSLAD- 440
                                                              |..||:.::|||.: 
  Fly   834 CNHPELFERRDARSPFFMRCAEYTIPRLIHEEGLIHRMLPSRKHLLYNRFNIFKSEYIQRSLFED 898

  Fly   441 ------------CN--------------------------------------------------- 442
                        |:                                                   
  Fly   899 VNVNSCFGFTRLCDLSVGDMVEVTLNGLIDFLLHYRRVLEKYPLLAYRRFWWKKQPDSRYQLLEP 963

  Fly   443 ---------------------------EKASLTALAD---------------------------- 452
                                       .::|:.|..|                            
  Fly   964 MLENKLALDYMPPNSVLKNFIFTAMTANESSVYAFGDYFTYNMQETIEHRVIRSKILKKKTSLIE 1028

  Fly   453 ----------------------------ITTL--------------KKIC---SHPDLIY---EK 469
                                        :|||              |.:|   |.|.::|   :|
  Fly  1029 EMEDVSKQKLEIESVEVQTKSNAKSDVKVTTLLLLPEFPHRPRKPRKYVCEPLSMPRILYDLGQK 1093

  Fly   470 LTA-----------------REKGFENSQN--------------------VLPSNYKPKDLNPEL 497
            :.|                 |....||||.                    |:|.    |:.....
  Fly  1094 VQAVHRYLYCDSRSAAWSQIRHNQCENSQGRELVSSGLALCKPHGGWSSIVVPD----KETLITD 1154

  Fly   498 SGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRF 562
            :||..:||.:|..::|.|: :|::.|..|:.:||.|:....||:.::||||:..|..|..:|..|
  Fly  1155 AGKLFVLDNLLTRLKANGH-RVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGSSKISARRDMVADF 1218

  Fly   563 NDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVAS 627
             ...:|.|:|:||::|||.|:||..|:.:..:|.||||..|:|||.|..|.||.|...:|||:..
  Fly  1219 -QTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLICK 1282

  Fly   628 GSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQ 692
            |:|||:||||...|..:...:|...     :|..|.||....... :|.|...::|.::..:...
  Fly  1283 GTIEERILQRAREKSEIQRMVISGG-----NFKPDTLKPKEVVSL-LLDDEEIEMKYRQEAKLQS 1341

  Fly   693 MKPPPEDT 700
            ..|.|..|
  Fly  1342 SSPIPAAT 1349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 6/49 (12%)
HepA <156..650 CDD:440319 165/809 (20%)
DEXHc_RAD54A 156..396 CDD:350825 66/261 (25%)
Ino80NP_732413.1 HepA 364..>855 CDD:440319 95/475 (20%)
DEXQc_INO80 535..763 CDD:350760 66/261 (25%)
SF2_C_SNF 1146..1280 CDD:350180 53/139 (38%)
PHA03247 <1535..1637 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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