Protein Alignment okr and Chd5

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: XP_006538992.1
• Gene: Chd5 / 269610
• MGIID: 3036258
• Length: 1955
• Species: Mus musculus
• Alignment Length: 654
• Identity: 195/654 - (29%)
• Similarity: 306/654 - (46%)
• Gaps: 96/654 - (14%)

  Fly   147 VVDPLL------------SNILRPHQREGVRFM-YECVEGKRGNFNGCIMADEMGLGKTLQCVTL 198
            :|||.:            ...|.|:|.||:.:: :...:|     ...|:|||||||||:|.:..
Mouse   681 IVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQG-----TDTILADEMGLGKTVQTIVF 740

  Fly   199 VWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWL------------HGRLLCLPMEGGTKE 251
            :::|.::|....|    .:|.:|.|.:.|||:||..|.            ..|.:....|...::
Mouse   741 LYSLYKEGHSKGP----YLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFED 801

  Fly   252 NTIRALEQ-FSM-TSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALM 314
            |.||..:: |.| ...::...|||.|||...|...||...|...::.||.|||||:.:..::.|.
Mouse   802 NAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLN 866

  Fly   315 GLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAI 379
            ..|...::||:|||:||:|.|.:.|:||:.||.......|...|         .|.:::::   |
Mouse   867 SYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF---------ADISKEDQ---I 919

  Fly   380 EKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFL-KSDQVRRSLADCNE 443
            :|..:|:|   ..::||....:.|.:|.|.|:::..:|:.:|.:.|...| ::.:...|....|:
Mouse   920 KKLHDLLG---PHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGNQ 981

  Fly   444 KASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPS-NYKPKDLNPELSGKFMLLDFM 507
            .:.|..:.|   |||.|:||.|.  .:.|.|      ..|||: :|....| .:.|||.|||..|
Mouse   982 VSLLNIMMD---LKKCCNHPYLF--PVAAVE------APVLPNGSYDGSSL-VKSSGKLMLLQKM 1034

  Fly   508 LAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLF 572
            |..:|.||: :|::.|..|:.|||.|.......|.:.|:||.::...|.:.:||||.|.:..|.|
Mouse  1035 LKKLRDEGH-RVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCF 1098

  Fly   573 MLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQR 637
            :||::|||.|:||..|:.:.::|.||||.||.||.:|..|.||.|...|||.|...|:||:|.|.
Mouse  1099 LLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQV 1163

  Fly   638 QTHKKSLSSTII-DNNESAEKHFTRDDLKDLFTFDANIL--SDTHDKLKCKRCVQNIQMKPPPED 699
            ...|..|:..:: ....|.....|:.:|.|:..|....|  .|....:.     |..:...|..|
Mouse  1164 AKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMS-----QGQRPTTPIPD 1223

  Fly   700 TDCTSHLS-----QWYHCS----NNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEAT 755
            ...|...|     :..|.|    :|:.:.|             |.|.|:...|...:....::||
Mouse  1224 IQSTKGGSLTAGAKKKHGSTPPGDNKDVED-------------SSVIHYDDAAISKLLDRNQDAT 1275

  Fly   756 DQPE 759
            |..|
Mouse  1276 DDTE 1279

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137
		HepA	<156..650	CDD:440319	168/511 (33%)
		DEXHc_RAD54A	156..396	CDD:350825	76/254 (30%)
Chd5	XP_006538992.1	CHDNT	148..203	CDD:462357
		PHD1_CHD_II	347..389	CDD:277006
		PHD2_CHD_II	420..462	CDD:277007
		CD1_tandem_CHD3-4_like	467..546	CDD:349314
		CD2_tandem_CHD3-4_like	591..644	CDD:349309
		PLN03142	700..>1218	CDD:215601	176/559 (31%)
		DUF1087	1300..1353	CDD:461922
		CHDII_SANT-like	1394..1534	CDD:461920
		LGT	<1535..1687	CDD:469786
		CHDCT2	1734..1879	CDD:462358