Protein Alignment okr and rhp26

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_588091.1
• Gene: rhp26 / 2539473
• PomBaseID: SPCP25A2.02C
• Length: 973
• Species: Schizosaccharomyces pombe
• Alignment Length: 858
• Identity: 240/858 - (27%)
• Similarity: 375/858 - (43%)
• Gaps: 193/858 - (22%)

  Fly    35 QELEREQELDRRRLGALRDASNTSELPLPIRFTANSEYELAIAK--------------------- 78
            :||||::.:   |.|.:....|.|.|...:.|...|....|:.|
pombe   120 EELERQELI---RTGKVTPFRNLSGLQKEVDFDDESSIREAVIKSEGTYYETAPHLSSEPSNIDH 181

  Fly    79 -VLARKFKVPMDNYVP-------------DYGGKRVLGVRR---CISRRPLHDPMAC-------- 118
             ::.|..|   |.||.             |.|...|...|.   |.:|:.|.|..:.
pombe   182 GIIPRDEK---DEYVTVDAVTEKVVTAAIDDGDDLVYRQRLNAWCANRKELRDQASASENNKDRG 243

  Fly   119 -----NALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPH----QREGVRFMYE--CVE 172
                 :..:|.||....:....|.             .:...:|||    |...|::::|  |.|
pombe   244 EFEGKDEWLLPHPSKKGQTFEGGF-------------TIPGDIRPHLFRYQVTCVQWLWELYCQE 295

  Fly   173 GKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEF-TKWL 236
            .      |.|:.||||||||:|.|:.:.:|...|...||    |::|.|::|:|.|..|| |.|.
pombe   296 A------GGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKP----ALIVCPATLMKQWVNEFHTWWA 350

  Fly   237 HGRLLCLPMEGGTKENTIRALEQF-----------SMTSARL-GTP------------------- 270
            ..|::.|... |:.:...|...|:           |.||.:| |..
pombe   351 PLRVVVLHAT-GSGQRASREKRQYESDASESEAEESKTSIKLRGASSSFHRYAKNLVESVFTRGH 414

  Fly   271 VLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTE 335
            :|:.:|...|||.:::...|.|..:.||||:::|.|:....:...::|..|::||||||||:|||
pombe   415 ILITTYAGLRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTE 479

  Fly   336 YYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQI 400
            .::|.:||.|..|||..||:..|...|..|...:::..:.|.|.:....|..|:...::||....
pombe   480 LWNLFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMKLD 544

  Fly   401 LTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDL 465
            :...||.|.|.|:..|||.:|.:.|.:||:...:::.|   |.|..:  |..|..|:|||:||||
pombe   545 VAADLPKKSEQVLFCKLTPLQRKAYQDFLQGSDMQKIL---NGKRQM--LYGIDILRKICNHPDL 604

  Fly   466 IYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLD 530
            :..:....::.:         ||.    :||.|||..::..:|...:.:|: :.:|.|...|.||
pombe   605 VTREYLLHKEDY---------NYG----DPEKSGKLKVIRALLTLWKKQGH-RTLLFSQTRQMLD 655

  Fly   531 LFE-QLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFM 593
            :.| .|.......:.|:||:.||..|..:||.||  :::.| :|:|:::.||.|:||.||:|:.:
pombe   656 ILEIGLKDLPDVHYCRMDGSTSIALRQDLVDNFN--KNEYFDVFLLTTRVGGLGVNLTGADRVIL 718

  Fly   594 FDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKH 658
            |||||||:.|.||..|.||.||||...:|||:.:|:|||||..||..|:.|::.|: .:....:.
pombe   719 FDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKIL-KDPKQRRF 782

  Fly   659 FTRDDLKDLFTFDANILSDT--------------------------------------HDKLKC- 684
            |...||.||||...|....|                                      |||.|.
pombe   783 FKMTDLHDLFTLGDNKTEGTETGSMFLGSERVLRKDNSSRNGNEAEDIPARDRKKHKIHDKGKKV 847

  Fly   685 -------KRCVQNIQMKPPPEDTDCTSHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQ 742
                   |..:.:::...||::::.|...|.  ....:..:.|:|.|.|.:............||
pombe   848 NSSKVFEKMGIASMEKYKPPQESNVTKTNSD--STLGDDSVLDDIFASAGIQSTLKHDDIMEASQ 910

  Fly   743 AQEIVPSAEEEAT 755
            .:.|:  .|:|||
pombe   911 TESIL--VEKEAT 921

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137	15/100 (15%)
		HepA	<156..650	CDD:440319	181/533 (34%)
		DEXHc_RAD54A	156..396	CDD:350825	86/277 (31%)
rhp26	NP_588091.1	cc_ERCC-6_N	5..71	CDD:411064
		HepA	56..763	CDD:440319	206/693 (30%)