DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and Rad54l

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_033041.3 Gene:Rad54l / 19366 MGIID:894697 Length:747 Species:Mus musculus


Alignment Length:760 Identity:423/760 - (55%)
Similarity:551/760 - (72%) Gaps:32/760 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRRSLAPSQRGPLRPESRHS---------FTPPLLKKNKRSCQQELEREQELD--RRRLGALRDA 54
            |||||||||....:||.|.|         .||   ||.|.|.:.::: |..|.  |:.|..|.:.
Mouse     1 MRRSLAPSQLARRKPEDRSSDDEDWQPGTVTP---KKRKSSSETQVQ-ECFLSPFRKPLTQLLNR 61

  Fly    55 SNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACN 119
            ....:         :|::|..|..:|::.||||:.||.... |.|.||::|...||.||||:...
Mouse    62 PPCLD---------SSQHEAFIRSILSKPFKVPIPNYQGPL-GSRALGLKRAGVRRALHDPLEEG 116

  Fly   120 ALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR--GNFNGCI 182
            ||||:.||..:.|:::.:|..|:.|||||||:||.:|||||||||:|::|||..:|  |: :|||
Mouse   117 ALVLYEPPPLSAHDQLKLDKEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTSRRIPGS-HGCI 180

  Fly   183 MADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEG 247
            |||||||||||||:||:||||||.|||||.|.||:|||||||||||..|..|||.||:..|.::|
Mouse   181 MADEMGLGKTLQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDG 245

  Fly   248 GTKENTIRALEQF-SMTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQ 311
            |:|:...|.||.| :...||:.:|:|:|||||||::..:|.|..||:||||||||||||:|.|||
Mouse   246 GSKDEIDRKLEGFMNQRGARVPSPILIISYETFRLHVGVLKKGNVGLVICDEGHRLKNSENQTYQ 310

  Fly   312 ALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQ 376
            ||..|.|.||||:|||||||||.||:|||:|||..:||||..||::||..||:.::..::|.:||
Mouse   311 ALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKSRDAAASEADRQ 375

  Fly   377 RAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADC 441
            |..|:.:||||:|::|:||||:.||:||||||.|.|:|.:||.:|.|||..||:..:....|.: 
Mouse   376 RGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPEEELRE- 439

  Fly   442 NEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDF 506
             .|.|:::|:.||:|||:|:||.|||:|..|.|.|||.:..:.|..|..|.:.|:||||.::||:
Mouse   440 -GKMSVSSLSSITSLKKLCNHPALIYDKCVAEEDGFEGTLGIFPPGYNSKAVEPQLSGKMLVLDY 503

  Fly   507 MLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFL 571
            :||..|:..:|||||:|||||||||||:|.|.|:|.:||||||||||||:|||:|||.|.|..|:
Mouse   504 ILAVTRSRSSDKVVLVSNYTQTLDLFEKLCRVRRYLYVRLDGTMSIKKRAKVVERFNSPSSPDFV 568

  Fly   572 FMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQ 636
            ||||||||||||||||||||.|||||||||||||||||||||||||.||||||:::|:|||||.|
Mouse   569 FMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQ 633

  Fly   637 RQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTD 701
            ||:|||:|||.::|..:..|:||:..:||:|||.|...||||||:|.|:|||.|.|:.|||:.:|
Mouse   634 RQSHKKALSSCVVDEEQDVERHFSLGELKELFTLDEASLSDTHDRLHCRRCVNNRQVWPPPDGSD 698

  Fly   702 CTSHLSQWYHCSNNRGLPDNILAQAW-MDCKCVSFVFHHRSQAQE 745
            |||.|:||.|.::.|||.|.:|..|| .....::||||.||..::
Mouse   699 CTSDLAQWNHSTDKRGLQDEVLQAAWDASSTAITFVFHQRSHEEQ 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 23/49 (47%)
HepA <156..650 CDD:440319 313/496 (63%)
DEXHc_RAD54A 156..396 CDD:350825 150/242 (62%)
Rad54lNP_033041.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 19/43 (44%)
Required for chromatin remodeling, strand pairing activities and coupling of ATPase activity. /evidence=ECO:0000250 2..9 6/6 (100%)
HepA <97..647 CDD:440319 340/552 (62%)
DEXHc_RAD54A 153..395 CDD:350825 150/242 (62%)
DEGH box 296..299 2/2 (100%)

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