Protein Alignment okr and smrc-1

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_741192.1
• Gene: smrc-1 / 175907
• WormBaseID: WBGene00015806
• Length: 690
• Species: Caenorhabditis elegans
• Alignment Length: 743
• Identity: 161/743 - (21%)
• Similarity: 276/743 - (37%)
• Gaps: 225/743 - (30%)

  Fly    34 QQELEREQELDRRRLGALRD----------ASNTSELP-------LPIRFTANSEYELAIAKVLA 81
            :|.:.:::|...||..|.|:          ||.:|..|       :|:.|:.|.:....:...:.
 Worm     8 RQAIAKKREEAIRRAAAYREREMQAAANATASTSSAAPPAPPKPVIPVMFSQNRQNFQPMKPTMN 72

  Fly    82 RKFK-VPMDNYV-------------PDYGGKRVL--GVRRCISRRPLH----------------- 113
            ...| ..::||:             |..|.|..|  |.|..|...|.|
 Worm    73 NSTKQSTINNYIKQVQKPEPTSLIKPTIGVKLKLDIGDRIKIEFYPFHSAVIDLIKQVPSRNYDP 137

  Fly   114 -----------------------------DPMACNALVL--FHPPAYTEHERMGMDPTKVLVHVV 147
                                         :|:..|.:.|  |.|.|....           ::.|
 Worm   138 AKRSWTVASSDHITISNILKNATAVKVELEPLPQNIIGLTNFKPKAAPSD-----------LNTV 191

  Fly   148 VDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLV------WTLLRQG 206
            :||.|...|.|:|:|||.|..| .:|:      .::||||||||::|.:|:.      |.||
 Worm   192 MDPSLIERLFPYQKEGVIFALE-RDGR------ILLADEMGLGKSVQALTIARYYKADWPLL--- 246

  Fly   207 PECKPTINKAIVVSPSSLVKNWEKE---FTKWLHGRLLCL-----PMEGGTKENTIRALEQFSMT 263
                       :|.|:|:...|:|:   |...:| |:..:     |:......||
 Worm   247 -----------IVCPASVKGAWKKQLNTFFPIIH-RIFIVDKSSDPLPDVCTSNT---------- 289

  Fly   264 SARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKN--------SDNLTYQALMGLKTKR 320
                   |.::|||...:..:||.|.:...:|.||.|.||:        :.:|:..||      .
 Worm   290 -------VAIMSYEQMVLKHDILKKEKYRTIIFDESHMLKDGKARRTKVATDLSKVAL------H 341

  Fly   321 RVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQE---RQRAIEKT 382
            .:||||||..:..:|.::.:..::.::.       .||....:|  ..|..:..   ..:....:
 Worm   342 VILLSGTPALSRPSELFTQIRLIDHKLF-------TNFHEFAIR--YCDGKQGRFCFEAKGCTNS 397

  Fly   383 QELIGLV-DQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKAS 446
            :||..:: .:.:|||....:.|.||.|...|:......|...:       |.::::.||..:..|
 Worm   398 EELAAIMFKRLMIRRLKADVLKDLPEKRREVVYVSGPTIDARM-------DDLQKARADYEKVNS 455

  Fly   447 LTALADITTLKKICSHPDLI-YEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAA 510
            :..           .|..|: :..||...|.....:::| .||...|..|.
 Worm   456 MER-----------KHESLLEFYSLTGIVKAAAVCEHIL-ENYFYPDAPPR-------------- 494

  Fly   511 IRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLS 575
                   ||::.:::...||..:....|||.|.:|:||.....:|:.:.|.| ..:.:..:.:||
 Worm   495 -------KVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSF-QTDDNIRVAVLS 551

  Fly   576 SKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTH 640
            ..|.|.|:.|..|:.:...:..:||....||..|..|.|||...::..|:|..:.:: ::.....
 Worm   552 ITAAGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADD-VMWNMVQ 615

  Fly   641 KK-------SLSSTIIDNNESAEKHFTR 661
            :|       ||||   |...:|:|...|
 Worm   616 QKLDVLGQVSLSS---DTFRTADKMHLR 640

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137	16/113 (14%)
		HepA	<156..650	CDD:440319	122/527 (23%)
		DEXHc_RAD54A	156..396	CDD:350825	63/265 (24%)
smrc-1	NP_741192.1	HARP	118..169	CDD:462166	2/50 (4%)
		DEXHc_HARP_SMARCAL1	200..412	CDD:350768	63/265 (24%)
		SF2_C_SNF	474..601	CDD:350180	36/149 (24%)