Protein Alignment okr and chd3

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: XP_002940874.3
• Gene: chd3 / 100216299
• XenbaseID: XB-GENE-1008908
• Length: 2036
• Species: Xenopus tropicalis
• Alignment Length: 764
• Identity: 198/764 - (25%)
• Similarity: 324/764 - (42%)
• Gaps: 169/764 - (22%)

  Fly   124 FHPPAYTEHERMGMD-----PTKV-------LVHVVV-----DPLLSNILRP------------H 159
            :|.|.|..|.::.|.     |.|.       .:|.|.     ||.:....:|            :
 Frog   694 YHKPLYWRHRQLMMGDSACCPQKYKRQHKESYLHGVPSSPINDPTVKYDTQPQFVSSTGGTLHMY 758

  Fly   160 QREGVRFM-YECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSS 223
            |.||:.:: :...:|     ...|:|||||||||:|.:..:::|.::|    .|....:|.:|.|
 Frog   759 QLEGLNWLRFSWAQG-----TDTILADEMGLGKTIQTIVFLYSLYKEG----HTQGPFLVSAPLS 814

  Fly   224 LVKNWEKEFTKWL------------HGRLLCLPMEGGTKENTIR-ALEQFSM-TSARLGTPVLLI 274
            .:.|||:||..|.            ..|.:....|...::|.:: ..:.|.| ..|::...|||.
 Frog   815 TIINWEREFQMWAPDFYVVTYTGDKDSRSVIRENEFSYQDNVMKGGKKAFKMKAQAQVKFHVLLT 879

  Fly   275 SYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSL 339
            |||...|....|.......::.||.|||||:.:..::.|.|.:...::||:|||:||:|.|.:.|
 Frog   880 SYELVTIDQAALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYQIDYKLLLTGTPLQNNLEELFHL 944

  Fly   340 VNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKY 404
            :||:.||.......|...|         .|.:::::   |:|..:|:|   ..::||....:.|.
 Frog   945 LNFLTPERFNNLDGFLEEF---------ADISKEDQ---IKKLHDLLG---PHLLRRMKADVFKN 994

  Fly   405 LPVKFEMVICAKLTAIQLELYTNFL-KSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYE 468
            :|.|.|:::..:|:.:|.:.|...| ::.:...|....|:.:.|..:.|   |||.|:||.|...
 Frog   995 MPAKTELIVRVELSPMQKKYYKFILTRNFEALNSRGGGNQVSLLNIMMD---LKKCCNHPYLFPA 1056

  Fly   469 KLTAREKGFENSQNVLPSN-YKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLF 532
            ......|        |||. |:...| .:.|||.:||..||..:..:|: :|::.|..|:.||:.
 Frog  1057 ASLESPK--------LPSGAYEGGSL-VKASGKLLLLHKMLRKLNEQGH-RVLIFSQMTKMLDIL 1111

  Fly   533 EQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPD 597
            |.......|.:.|:||.::...|.:.:||||.|.:..|.|:||::|||.|:||..|:.:.::|.|
 Frog  1112 EDFLDFEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSD 1176

  Fly   598 WNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTII------------- 649
            |||.||.||.:|..|.||.....|||.|...|:||:|.|....|..|:..::
 Frog  1177 WNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKAGSMSK 1241

  Fly   650 ----------------------DNNE--SAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQN 690
                                  ||.|  |:..|:....:..|...:.::..||.        |||
 Frog  1242 QELDDILKFGTEELFKDEIEAGDNKEDDSSVIHYDNGAIDRLLDRNQDVTEDTE--------VQN 1298

  Fly   691 IQMKPPPEDTDCTSHLSQW----YHCSNNRGL----------PDNILAQAWMDCKCVSFVFHHRS 741
            :           ..:||.:    |.......|          .:|:....|     ...:.||..
 Frog  1299 M-----------NEYLSSFKVAQYVVREEEKLEELEREVIKQEENVDPDYW-----EKLLRHHYE 1347

  Fly   742 QAQEIVP---------SAEEEATDQPEEKPESRKRSSTPASDDSADEDF 781
            |.||.:.         ..:....|..:|..:::...|..:.::  ||||
 Frog  1348 QQQEDLARNLGKGKRVRKQVNYNDAAQEDQDNQSEYSVGSEEE--DEDF 1394

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137	0/1 (0%)
		HepA	<156..650	CDD:440319	158/557 (28%)
		DEXHc_RAD54A	156..396	CDD:350825	72/266 (27%)
chd3	XP_002940874.3	CHDNT	195..250	CDD:462357
		PHD1_CHD_II	403..445	CDD:277006
		PHD2_CHD_II	479..521	CDD:277007
		CD1_tandem_CHD3-4_like	526..604	CDD:349314
		CD2_tandem_CHD3-4_like	647..701	CDD:349309	3/6 (50%)
		PLN03142	738..>1293	CDD:215601	164/591 (28%)
		DEXHc_CHD3	755..986	CDD:350813	71/254 (28%)
		DUF1087	1327..1377	CDD:461922	9/54 (17%)
		CHDII_SANT-like	1398..1537	CDD:461920
		PspC_subgroup_2	<1535..1750	CDD:468202
		CHDCT2	1781..1926	CDD:462358