DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and TUB2

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_116616.1 Gene:TUB2 / 850506 SGDID:S000001857 Length:457 Species:Saccharomyces cerevisiae


Alignment Length:448 Identity:163/448 - (36%)
Similarity:262/448 - (58%) Gaps:22/448 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLD 68
            |||.:..||||||||..||:.:|.|||:..:|......:...:|.:|:|.:|....::||::.:|
Yeast     3 EIIHISTGQCGNQIGAAFWETICGEHGLDFNGTYHGHDDIQKERLNVYFNEASSGKWVPRSINVD 67

  Fly    69 LEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSL 132
            |||..|:.:..|....|:.|:|....:  ..|||.||.| |::|.:|.:.|.|:|.|||:|.|||
Yeast    68 LEPGTIDAVRNSAIGNLFRPDNYIFGQ--SSAGNVWAKGHYTEGAELVDSVMDVIRREAEGCDSL 130

  Fly   133 EGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTT 197
            :||.:.||:.||||||||:.::.::.:.:|.:::.||||.|: .:.||.||:|||:.|::.:|..
Yeast   131 QGFQITHSLGGGTGSGMGTLLISKIREEFPDRMMATFSVLPS-PKTSDTVVEPYNATLSVHQLVE 194

  Fly   198 AADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIP 262
            .:|....:||.||..|....|.:..||:..:|||||::||..||:||||..:|::|..|...|:|
Yeast   195 HSDETFCIDNEALYDICQRTLKLNQPSYGDLNNLVSSVMSGVTTSLRYPGQLNSDLRKLAVNLVP 259

  Fly   263 TPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILN 327
            .|:|||.|.||.|||:   |.:|   :.|..||.::.:::...||||.:..|....   |:::..
Yeast   260 FPRLHFFMVGYAPLTA---IGSQ---SFRSLTVPELTQQMFDAKNMMAAADPRNGR---YLTVAA 315

  Fly   328 IIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSL 392
            ..:|:|...:|...:.:::.:....|:.|.|.::|.|:...:|   ....::...:||.|||..|
Yeast   316 FFRGKVSVKEVEDEMHKVQSKNSDYFVEWIPNNVQTAVCSVAP---QGLDMAATFIANSTSIQEL 377

  Fly   393 FERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLV---QEYEAATRED 447
            |:|..:|:..:.||.|||..:..|.:  |:| |..|:...::.||   |:|:.||.||
Yeast   378 FKRVGDQFSAMFKRKAFLHWYTSEGM--DEL-EFSEAESNMNDLVSEYQQYQEATVED 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 158/439 (36%)
TUB2NP_116616.1 beta_tubulin 2..426 CDD:276956 158/440 (36%)

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