DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and TUA1

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_176654.1 Gene:TUA1 / 842782 AraportID:AT1G64740 Length:450 Species:Arabidopsis thaliana


Alignment Length:470 Identity:143/470 - (30%)
Similarity:253/470 - (53%) Gaps:34/470 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGL--DRKDVFFYQADDDHYIPRAVL 66
            |||::.:||.|.|:|...|:..||||||.|.|.:...:..|.  |..:.||.:.....::||||.
plant     3 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVF 67

  Fly    67 LDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSD 130
            |||||.||:.:....|.:|::||.:...|.  .|.||:|.| |:.|.::.:...:.:.:.||...
plant    68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTVGREIVDTCLERLRKLADNCT 130

  Fly   131 SLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRL 195
            .|:||::.:::.||||||:||.::|||:..:.||....|:::|: .::|..||:||||:|:...|
plant   131 GLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPS-PQVSTAVVEPYNSVLSTHSL 194

  Fly   196 TTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPL 260
            ....|.||:|||.|:..|....|.|:.|::|.:|.|:|..:|..||:||:...:|.::......|
plant   195 LEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAINVDITEFQTNL 259

  Fly   261 IPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISI 325
            :|.|::||:::.|.|:.|.:..:.:|.      :|.::...:.:|.|||....|   .|..|::.
plant   260 VPYPRIHFMLSSYAPVISSAKAYHEQF------SVPEITTSVFEPSNMMAKCDP---RHGKYMAC 315

  Fly   326 LNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGL-----MLAN 385
            ..:.:|:|.|..|:.::..|:.::..||:.|.||..:..::...|.|.....::.:     |::|
plant   316 CLMYRGDVVPKDVNTAVAAIKAKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISN 380

  Fly   386 HTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDYMQ 450
            :|::..:|.|..:::|.:..:.||:..:..|.:   :..|..|:||.:..|.::||..       
plant   381 NTAVAEVFSRIDHKFDLMYSKRAFVHWYVGEGM---EEGEFSEAREDLAALEKDYEEV------- 435

  Fly   451 FSVKRGNGPVDSKSE 465
                .|.|..|...|
plant   436 ----GGEGAEDDDEE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 137/443 (31%)
TUA1NP_176654.1 PLN00221 1..435 CDD:177802 139/446 (31%)

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