DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and TUA5

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_197479.1 Gene:TUA5 / 832098 AraportID:AT5G19780 Length:450 Species:Arabidopsis thaliana


Alignment Length:471 Identity:143/471 - (30%)
Similarity:258/471 - (54%) Gaps:32/471 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGL--DRKDVFFYQADDDHYIPRAVL 66
            |||::.:||.|.|:|...|:..||||||.|.|::......|:  |..:.||.:.....::||||.
plant     3 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVF 67

  Fly    67 LDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSD 130
            :||||.||:.:....|.:|::||.:...|.  .|.||:|.| |:.|:::.:...|.:.:.||...
plant    68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKE--DAANNFARGHYTVGKEIVDLCLDRVRKLADNCT 130

  Fly   131 SLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRL 195
            .|:||::.:::.||||||:||.::|||:..|.||....|:::|: .::|..||:||||:|:...|
plant   131 GLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPS-PQVSTAVVEPYNSVLSTHSL 194

  Fly   196 TTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPL 260
            ....|..|:|||.|:..|....|.|:.|:::.:|.|:|.|:|..||:||:...:|.::......|
plant   195 LEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDITEFQTNL 259

  Fly   261 IPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISI 325
            :|.|::||:::.|.|:.|.:..:.:||      :|.::...:.:|.:||....|   .|..|::.
plant   260 VPYPRIHFMLSSYAPVISAAKAYHEQL------SVPEITNAVFEPASMMAKCDP---RHGKYMAC 315

  Fly   326 LNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGL-----MLAN 385
            ..:.:|:|.|..|:.::..|:.::..||:.|.||..:..::...|.|.....::.:     |::|
plant   316 CLMYRGDVVPKDVNAAVGTIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISN 380

  Fly   386 HTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDYMQ 450
            :|::..:|.|..:::|.:..:.||:..:..|.:   :..|..|:||.:..|.::||....|    
plant   381 NTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGM---EEGEFSEAREDLAALEKDYEEVGAE---- 438

  Fly   451 FSVKRGNGPVDSKSED 466
                 |....:.:.||
plant   439 -----GGDDEEDEGED 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 137/443 (31%)
TUA5NP_197479.1 PLN00221 1..435 CDD:177802 139/446 (31%)

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