DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gammaTub23C and TUB7

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_180515.1 Gene:TUB7 / 817504 AraportID:AT2G29550 Length:449 Species:Arabidopsis thaliana


Alignment Length:448 Identity:160/448 - (35%)
Similarity:266/448 - (59%) Gaps:22/448 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLD 68
            ||:.:|.||||||||.:||:.:.|||||..:|.....:...|:|.:|::.:|....|:|||||:|
plant     3 EILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQLERVNVYYNEASCGRYVPRAVLMD 67

  Fly    69 LEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSL 132
            |||..::::....|.:::.|:|....:  .|||||||.| |::|.:|.:.|.|::.:||:..|.|
plant    68 LEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCL 130

  Fly   133 EGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTT 197
            :||.:|||:.||||||||:.::.::.:.||.:::.||||||: .::||.||:|||:.|::.:|..
plant   131 QGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPS-PKVSDTVVEPYNATLSVHQLVE 194

  Fly   198 AADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIP 262
            .||..:||||.||..|....|.:..|||..:|:|:|..||..|..||:|..:|::|..|...|||
plant   195 NADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIP 259

  Fly   263 TPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILN 327
            .|:|||.|.|:.||||..   :||   .|..||.::.:::...||||.:..|   .|..|::...
plant   260 FPRLHFFMVGFAPLTSRG---SQQ---YRNLTVPELTQQMWDAKNMMCAADP---RHGRYLTASA 315

  Fly   328 IIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSL 392
            :.:|::...:|.:.:..::::..:.|:.|.|.:::..:....|   :..:::...:.|.|||..:
plant   316 MFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPP---TGLKMASTFIGNSTSIQEM 377

  Fly   393 FERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLV---QEYEAATRED 447
            |.|...|:..:.:|.|||..:..|.:   |..|..|:...::.||   |:|:.||.::
plant   378 FRRVSEQFTAMFRRKAFLHWYTGEGM---DEMEFTEAESNMNDLVSEYQQYQDATADE 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 157/439 (36%)
TUB7NP_180515.1 PLN00220 1..431 CDD:215107 160/445 (36%)

Return to query results.
Submit another query.