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Protein Alignment gammaTub23C and Tuba8

DIOPT Version :10

Sequence 1:	NP_476804.1	Gene:	gammaTub23C / 33501	FlyBaseID:	FBgn0260639	Length:	475	Species:	Drosophila melanogaster
Sequence 2:	NP_059075.1	Gene:	Tuba8 / 53857	MGIID:	1858225	Length:	449	Species:	Mus musculus

Alignment Length:	454	Identity:	142/454 - (31%)
Similarity:	240/454 - (52%)	Gaps:	25/454 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFA---NDGLDRKDVFFYQADDDHYIPRAV 65
            |.|::.:||.|.|||...|:..||||||...|.....|   ||. |....||.:..:..::||||
Mouse     3 ECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGTQASKINDD-DSFTTFFSETGNGKHVPRAV 66

  Fly    66 LLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGS 129
            ::||||.|::.:....|.:|::||.:...|.  .|.||:|.| |:.|::..:.|.|.|.:..|..
Mouse    67 MVDLEPTVVDEVRAGTYRQLFHPEQLITGKE--DAANNYARGHYTVGKESIDLVLDRIRKLTDAC 129

  Fly   130 DSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKR 194
            ..|:||::.||..||||||..|.:||||:..|.||....|:::| ..::|..||:||||:||...
Mouse   130 SGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHT 193

  Fly   195 LTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAP 259
            ....:|...::||.|:..|....|.|:.|:::.:|.|:|.|:|..|.:||:...:|.:|......
Mouse   194 TLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTN 258

  Fly   260 LIPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYIS 324
            |:|.|::||.:..|.|:.|....:.:||      :|.::.....:|.:.||...|   .|..|::
Mouse   259 LVPYPRIHFPLVTYAPIISAEKAYHEQL------SVAEITSSCFEPNSQMVKCDP---RHGKYMA 314

  Fly   325 ILNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGL-----MLA 384
            ...:.:|:|.|..|:.::..|:.::..||:.|.||..:|.::...|.|.....::.:     ||:
Mouse   315 CCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLS 379

  Fly   385 NHTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDY 448
            |.|:|...:.|..:::|.:..:.||:..:..|.:   :..|..|:||.:..|.::||....:.:
Mouse   380 NTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM---EEGEFSEAREDLAALEKDYEEVGTDSF 440

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.