DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and CG7794

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_650674.1 Gene:CG7794 / 42159 FlyBaseID:FBgn0038565 Length:455 Species:Drosophila melanogaster


Alignment Length:472 Identity:138/472 - (29%)
Similarity:243/472 - (51%) Gaps:35/472 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFF-YQADDDHYIPRAVLL 67
            |||.:.:||.|.||....|:..||||||..:|.|.....|  |....|| :.:......||.|::
  Fly     6 EIIQIHIGQAGVQIANACWELFCLEHGILANGRLTQSPMD--DSFLTFFEFTSHQPCVQPRLVMI 68

  Fly    68 DLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASGYS-QGEKLQEEVFDIIDREADGSDS 131
            |.||.||:.|....|..|::|:.:...|  ..:|:|:|.||: ...:|.:...:.|.|.||...:
  Fly    69 DTEPTVIDEIRTGSYRNLFHPDTLITGK--DDSGSNFARGYNLMASELLDRSMNAIRRVADRCRN 131

  Fly   132 LEGFILCHSIAGGTGSGMGSFIMERLADRYPKKL-IQTFSVFPNQDEISDVVVQPYNSMLTLKRL 195
            |.||::..:|.||:|||:|:.|||||.:.:.||: :..|.|:|: ..||.|:|:|||::|.....
  Fly   132 LRGFLVFRAIGGGSGSGLGTRIMERLVEDFGKKMTVVEFLVYPS-PSISPVIVEPYNALLAAHFS 195

  Fly   196 TTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPL 260
            ...||...::||.||..|..:.|::..|:::.:|.:::.::|..|.:.|:......:...|...|
  Fly   196 MDCADVSFIVDNEALYDICANTLNVPAPTYTNLNRIIAQVVSSFTASQRFGGGSTVSFQELQTNL 260

  Fly   261 IPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISI 325
            :|.|::|:.:..|.||.   .|...|.||:   :...:..:..|..|.||...|   :|..|::.
  Fly   261 VPYPRIHYPLINYAPLV---PISHSQFVNM---STAQLTGQCFQMSNQMVRCNP---SHGKYMAS 316

  Fly   326 LNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPY------VQSNHRVSGLMLA 384
            :.:.:|::.|.:::.:|:.|:..:..:|:.|.||..::.:|...||      :...:|.. :.::
  Fly   317 VLLYRGDIAPNEINTALENIKRNRSFRFVDWSPTGFKIGVSPMPPYYVPGGDLAPTNRAC-VAIS 380

  Fly   385 NHTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDYM 449
            |:|:|...:.|.:|::|||.:|.||:..:..|.:.:.:.|   |:.|.:..||        .||:
  Fly   381 NNTNIRIAWCRLVNKFDKLYQRRAFVYHYVGEGLEEGNFN---EASENICQLV--------HDYL 434

  Fly   450 QFSVKRGNGPVDSKSED 466
            :..........||..|:
  Fly   435 EVDASAPTSRRDSDPEE 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 133/444 (30%)
CG7794NP_650674.1 alpha_tubulin 5..436 CDD:276955 135/455 (30%)

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