Protein Alignment gammaTub23C and tubd1

DIOPT Version :10

• Sequence 1: NP_476804.1
• Gene: gammaTub23C / 33501
• FlyBaseID: FBgn0260639
• Length: 475
• Species: Drosophila melanogaster
• Sequence 2: NP_001002093.1
• Gene: tubd1 / 415183
• ZFINID: ZDB-GENE-040625-73
• Length: 446
• Species: Danio rerio
• Alignment Length: 479
• Identity: 128/479 - (26%)
• Similarity: 215/479 - (44%)
• Gaps: 98/479 - (20%)

  Fly     5 IITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRK-------DVFFYQADDDHYIP 62
            :::|||||||||||.|.:            .|:.|.:| |.:||       :.||||......:.
Zfish     3 VVSLQLGQCGNQIGHELF------------SVISDDSN-GPNRKKYKQCSDERFFYQNSAGELVA 54

  Fly    63 RAVLLDLEPRVINTIMGSVYSK----LYNPENVYLSKHGGGAGNNWASGYS-QGEKLQEEVFDII 122
            |:||:|:||:||:..:... ||    .|..:..:..|.  |:|||||:|:. .|.:.:|:|.|::
Zfish    55 RSVLVDMEPKVISQALAKA-SKSGRWRYGDKAHFSQKQ--GSGNNWANGFCVHGPRHKEDVEDLV 116

  Fly   123 DREADGSDSLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYN 187
            ..|.:..|.|.|.....|:|||||||:|::|.:||.|.||:..|.....:|.  ...:|:||.||
Zfish   117 RMEVERCDRLAGIFTMMSVAGGTGSGVGTYITQRLRDLYPQSFILNQVTWPY--GAGEVIVQNYN 179

  Fly   188 SMLTLKRLTTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVS-TIMSV--STTTLRYPSYM 249
            |:|||..|...:|:::|.:|..:::|....::|::.|.|.||.::| .:.||  ...|...|.|.
Zfish   180 SVLTLSHLYQLSDAILVHENDTVHKICSQLMNIKHISISDINKVISHQLASVLQPVYTAHSPDYY 244

  Fly   250 NNNLIG-LTAPLIPTPQLHFLMTGYTPLTSDSDI------------HTQQL-------------- 287
            :.|.|| |...|:..|:...|.....|..|.:.:            |.:|:
Zfish   245 SRNPIGELLTSLVCHPEYKLLSLCNIPQMSSTSLAYSVFNWPGLLKHLRQMLIASARMEEGIDWT 309

  Fly   288 VNVRKT------TVLDVMRRLLQPK--NMMVSTGPDKSNHHCYISILNIIQGEVDPTQVHKSLQR 344
            |||...      :|.::..:.....  |:::..|.|.|.        .:..|..||
Zfish   310 VNVPSVVLSGAESVTNIRHKSFNSSLANLLILRGKDVST--------AVTDGFKDP--------- 357

  Fly   345 IRDRKMAQFIPWGPTSIQVALSR-SSPYVQSNHRVSGLMLANHTSICSLFERALNQYDKLRKRGA 408
                  ..::||  ...:.:.|. |||...:.:..|..:::|..|:....:..:.:...:....|
Zfish   358 ------LLYVPW--LKAENSFSTWSSPIPFNGYEKSATLVSNSQSLLKPLDNIVRKAWNMFASRA 414

  Fly   409 FLDQFRR----EDIFKDDLNELDE 428
            ::.|:.:    |:.|.|....|::
Zfish   415 YIHQYTKFGISEEDFLDSFTALEQ 438

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
gammaTub23C	NP_476804.1	gamma_tubulin	4..440	CDD:276957	128/479 (27%)
tubd1	NP_001002093.1	delta_zeta_tubulin-like	2..445	CDD:276958	128/479 (27%)