DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and betaTub85D

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_524290.2 Gene:betaTub85D / 41124 FlyBaseID:FBgn0003889 Length:446 Species:Drosophila melanogaster


Alignment Length:459 Identity:156/459 - (33%)
Similarity:264/459 - (57%) Gaps:22/459 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLD 68
            ||:.:|.||||||||.:||:.:..||.|..:|.....::..|:|.:|::.:|....|:|||:|:|
  Fly     3 EIVHIQAGQCGNQIGGKFWEVISDEHCIDATGTYYGDSDLQLERINVYYNEATGAKYVPRAILVD 67

  Fly    69 LEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSL 132
            |||..::::....:.:::.|:|....:  .|||||||.| |::|.:|.:.|.|::.:|::|.|.|
  Fly    68 LEPGTMDSVRSGAFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKESEGCDCL 130

  Fly   133 EGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTT 197
            :||.|.||:.||||||||:.::.::.:.||.:::.||||.|: .::||.||:|||:.|::.:|..
  Fly   131 QGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLVE 194

  Fly   198 AADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIP 262
            ..|....:||.||..|....|.:..|::..:|:|||..||..||.||:|..:|.:|..|...::|
  Fly   195 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 259

  Fly   263 TPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILN 327
            .|:|||.|.|:.||||..   :||   .|..||.::.:::...||||.:..|   .|..|:::..
  Fly   260 FPRLHFFMPGFAPLTSRG---SQQ---YRALTVPELTQQMFDAKNMMAACDP---RHGRYLTVAA 315

  Fly   328 IIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSL 392
            |.:|.:...:|.:.:..|:::..:.|:.|.|.:.:.|:....|   ...::|...:.|.|:|..|
  Fly   316 IFRGRMSMKEVDEQMLNIQNKNSSFFVEWIPNNCKTAVCDIPP---RGLKMSATFIGNSTAIQEL 377

  Fly   393 FERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLV---QEYEAATREDYMQFSVK 454
            |:|...|:..:.:|.|||..:..|.:   |..|..|:...::.||   |:|:.||.::..:|...
  Fly   378 FKRVSEQFTAMFRRKAFLHWYTGEGM---DEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDED 439

  Fly   455 RGNG 458
            ...|
  Fly   440 EEGG 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 151/439 (34%)
betaTub85DNP_524290.2 PLN00220 1..430 CDD:215107 153/444 (34%)

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