DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and tubg1

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_957202.1 Gene:tubg1 / 393882 ZFINID:ZDB-GENE-040426-836 Length:451 Species:Danio rerio


Alignment Length:454 Identity:360/454 - (79%)
Similarity:404/454 - (88%) Gaps:5/454 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPSEIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAV 65
            ||.||||||||||||||||||||:||.||||||.|::|:||.:|.||||||||||||:|||||||
Zfish     1 MPREIITLQLGQCGNQIGFEFWKQLCAEHGISPEGIVEEFATEGTDRKDVFFYQADDEHYIPRAV 65

  Fly    66 LLDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASGYSQGEKLQEEVFDIIDREADGSD 130
            |||||||||:||:.|.|:.||||||:|||:||||||||||||:|||||:.|::||||||||||||
Zfish    66 LLDLEPRVIHTILNSPYANLYNPENIYLSEHGGGAGNNWASGFSQGEKIHEDIFDIIDREADGSD 130

  Fly   131 SLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRL 195
            |||||:||||||||||||:||:::|||.|||||||:||:||||||||:||||||||||:||||||
Zfish   131 SLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKLVQTYSVFPNQDEMSDVVVQPYNSLLTLKRL 195

  Fly   196 TTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPL 260
            |..||.|||||||||||||.||||||||||||||.|||||||.||||||||.||||:||||.|.|
Zfish   196 TQNADCVVVLDNTALNRIATDRLHIQNPSFSQINQLVSTIMSASTTTLRYPGYMNNDLIGLIASL 260

  Fly   261 IPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISI 325
            ||||:||||||||||||:|     |.:.:||||||||||||||||||:|||||.|:..:||||:|
Zfish   261 IPTPRLHFLMTGYTPLTTD-----QSVASVRKTTVLDVMRRLLQPKNVMVSTGRDRQTNHCYIAI 320

  Fly   326 LNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSIC 390
            |||||||||||||||||||||:||:|.||||||.||||||||.|||:.|.|||||||:||||||.
Zfish   321 LNIIQGEVDPTQVHKSLQRIRERKLANFIPWGPASIQVALSRRSPYLPSAHRVSGLMMANHTSIS 385

  Fly   391 SLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDYMQFSVK 454
            |||||...||||||||.|||:|||:||||||:.:|||.|||.|..||.||.||||.||:.:..:
Zfish   386 SLFERTCRQYDKLRKREAFLEQFRKEDIFKDNFDELDNSREVVQQLVDEYSAATRPDYISWGTQ 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 350/435 (80%)
tubg1NP_957202.1 gamma_tubulin 3..435 CDD:276957 350/436 (80%)

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