DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and tuba5

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_997937.1 Gene:tuba5 / 337223 ZFINID:ZDB-GENE-030131-9167 Length:449 Species:Danio rerio


Alignment Length:455 Identity:144/455 - (31%)
Similarity:242/455 - (53%) Gaps:26/455 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGL--DRKDVFFYQADDDHYIPRAVL 66
            |.|::.:||.|.|||...|:..||||||.|.|.:......|.  |..:.||.:.....::||||.
Zfish     3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGNMPSDKTIGKSDDSFNTFFSETGSGKHVPRAVF 67

  Fly    67 LDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSD 130
            :||||.||:.:....|.:|::||.:...|.  .|.||:|.| |:.|:::.:.|.:.:.:..|...
Zfish    68 VDLEPAVIDEVRSGTYRQLFHPEQLISGKE--DAANNYARGHYTVGKEIIDMVLERVRKLTDQCT 130

  Fly   131 SLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRL 195
            .|:||::.||..||||||..|.:||||:..|.||....|:::| ..::|..||:||||:||....
Zfish   131 GLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNSILTTHTT 194

  Fly   196 TTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPL 260
            ...:|...::||.|:..|....|.|:.||::.:|.|:..|:|..|.:||:...:|.:|......|
Zfish   195 LEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259

  Fly   261 IPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISI 325
            :|.|::||.:..|:|:.|....:.:||      :|.::.....:|.|.||...|   .|..|::.
Zfish   260 VPYPRIHFPLVTYSPIISAEKAYHEQL------SVSEITSACFEPSNQMVKCDP---RHGKYMAC 315

  Fly   326 LNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGL-----MLAN 385
            ..:.:|:|.|..|:.::..|:.::..||:.|.||..:|.::...|.|.....::.:     ||:|
Zfish   316 CMLYRGDVVPKDVNAAIANIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 380

  Fly   386 HTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYE---AATRED 447
            .|:|...:.|..:::|.:..:.||:..:..|.:   :..|..|:||.:..|.::||   |.:.||
Zfish   381 TTAISEAWARLDHKFDLMYAKRAFVHWYVGEGM---EEGEFSEAREDLAALEKDYEEVGADSTED 442

  Fly   448  447
            Zfish   443  442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 139/443 (31%)
tuba5NP_997937.1 PTZ00335 1..449 CDD:185562 144/455 (32%)

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