DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and Tuba1a

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_035783.1 Gene:Tuba1a / 22142 MGIID:98869 Length:451 Species:Mus musculus


Alignment Length:471 Identity:148/471 - (31%)
Similarity:246/471 - (52%) Gaps:31/471 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVL--EDFANDGLDRKDVFFYQADDDHYIPRAVL 66
            |.|::.:||.|.|||...|:..||||||.|.|.:  :.....|.|..:.||.:.....::||||.
Mouse     3 ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVF 67

  Fly    67 LDLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSD 130
            :||||.||:.:....|.:|::||.:...|.  .|.||:|.| |:.|:::.:.|.|.|.:.||...
Mouse    68 VDLEPTVIDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIIDLVLDRIRKLADQCT 130

  Fly   131 SLEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRL 195
            .|:||::.||..||||||..|.:||||:..|.||....||::| ..::|..||:||||:||....
Mouse   131 GLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYP-APQVSTAVVEPYNSILTTHTT 194

  Fly   196 TTAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPL 260
            ...:|...::||.|:..|....|.|:.|:::.:|.|:..|:|..|.:||:...:|.:|......|
Mouse   195 LEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNL 259

  Fly   261 IPTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISI 325
            :|.|::||.:..|.|:.|....:.:||      :|.::.....:|.|.||...|   .|..|::.
Mouse   260 VPYPRIHFPLATYAPVISAEKAYHEQL------SVAEITNACFEPANQMVKCDP---RHGKYMAC 315

  Fly   326 LNIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGL-----MLAN 385
            ..:.:|:|.|..|:.::..|:.::..||:.|.||..:|.::...|.|.....::.:     ||:|
Mouse   316 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSN 380

  Fly   386 HTSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYEAATREDYMQ 450
            .|:|...:.|..:::|.:..:.||:..:..|.:   :..|..|:||.:        ||..:||.:
Mouse   381 TTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGM---EEGEFSEAREDM--------AALEKDYEE 434

  Fly   451 FSVKRGNGPVDSKSED 466
            ..|....|..:.:.|:
Mouse   435 VGVDSVEGEGEEEGEE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 141/443 (32%)
Tuba1aNP_035783.1 PTZ00335 1..440 CDD:185562 146/459 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 432..451 4/19 (21%)

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