DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and Y19D2B.1

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_496352.1 Gene:Y19D2B.1 / 189479 WormBaseID:WBGene00012489 Length:85 Species:Caenorhabditis elegans


Alignment Length:92 Identity:22/92 - (23%)
Similarity:39/92 - (42%) Gaps:24/92 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 MAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSLFERALNQYDKLRKRGAFLDQFR 414
            |..|||:                   |.|  .||::.|:|...:.|...::|.:..:.||:..:.
 Worm     1 MVSFIPF-------------------HNV--CMLSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYV 44

  Fly   415 REDIFKDDLNELDESRETVDCLVQEYE 441
            .|.:   :..|..|:||.:..|.::||
 Worm    45 GEGM---EEGEFTEAREDLAALEKDYE 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 20/89 (22%)
Y19D2B.1NP_496352.1 PTZ00335 <10..83 CDD:185562 17/64 (27%)

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