DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and tba-7

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_499463.1 Gene:tba-7 / 176568 WormBaseID:WBGene00006533 Length:444 Species:Caenorhabditis elegans


Alignment Length:445 Identity:143/445 - (32%)
Similarity:238/445 - (53%) Gaps:26/445 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGV-LEDFANDGLDRKDVFFYQADDDHYIPRAVLL 67
            |:|::.:||.|.|||...|:..||||||.|.|. :|...|.|  ....||.......::||::.:
 Worm     3 EVISIHVGQAGVQIGNACWELYCLEHGILPDGTSMEPDGNSG--SLGTFFSDTGYGRHVPRSIFV 65

  Fly    68 DLEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDS 131
            ||||.|::.|....|.||::||.:...|.  .|.||:|.| |:.|:::.:...|.|.|.|:..:.
 Worm    66 DLEPTVVDEIRTGAYKKLFHPEQMLTGKE--DAANNYARGHYTVGKEIIDTTLDRIRRLANNCEG 128

  Fly   132 LEGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLT 196
            |:||.:.||..||||||..|.:||||:..|.||....||::| ..:||..||:||||:||.....
 Worm   129 LQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYP-APQISTSVVEPYNSILTTHTTL 192

  Fly   197 TAADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLI 261
            ..:|...::||.|:..|....|.:..|:::.:|.::|.::|..|.:||:...:|.:|......|:
 Worm   193 EHSDCSFMVDNEAIYDICRRNLRVSRPTYNNLNRIISQVVSSITASLRFDGALNVDLNEFQTNLV 257

  Fly   262 PTPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISIL 326
            |.|::||.:..|.||.|.:  |.:.|      :|.::.:...:..|.||...|   .|..|:::.
 Worm   258 PYPRIHFPLVAYNPLISSA--HHEFL------SVDEITKSCFEASNQMVKCDP---KHGKYMAVC 311

  Fly   327 NIIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGL-----MLANH 386
            .:.:|:|.|..|..:::.|:.::..||:.|.||..:|.|:...|.|.....::.:     ||:|.
 Worm   312 LLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNT 376

  Fly   387 TSICSLFERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLVQEYE 441
            |:|...::|...::|.:..:.||:..:..|.:   :..|..|:||.:..|.::||
 Worm   377 TAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGM---EEGEFSEAREDLAALEKDYE 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 141/442 (32%)
tba-7NP_499463.1 PTZ00335 1..443 CDD:185562 143/445 (32%)

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