DRSC/TRiP Functional Genomics Resources

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Protein Alignment gammaTub23C and TUBB4A

DIOPT Version :10

Sequence 1:NP_476804.1 Gene:gammaTub23C / 33501 FlyBaseID:FBgn0260639 Length:475 Species:Drosophila melanogaster
Sequence 2:NP_001276052.1 Gene:TUBB4A / 10382 HGNCID:20774 Length:495 Species:Homo sapiens


Alignment Length:467 Identity:157/467 - (33%)
Similarity:269/467 - (57%) Gaps:32/467 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 EIITLQLGQCGNQIGFEFWKRLCLEHGISPSGVLEDFANDGLDRKDVFFYQADDDHYIPRAVLLD 68
            ||:.||.||||||||.:||:.:..||||.|:|.....::..|:|.:|::.:|...:|:|||||:|
Human    54 EIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGNYVPRAVLVD 118

  Fly    69 LEPRVINTIMGSVYSKLYNPENVYLSKHGGGAGNNWASG-YSQGEKLQEEVFDIIDREADGSDSL 132
            |||..::::....:.:::.|:|....:  .|||||||.| |::|.:|.:.|.|::.:||:..|.|
Human   119 LEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCL 181

  Fly   133 EGFILCHSIAGGTGSGMGSFIMERLADRYPKKLIQTFSVFPNQDEISDVVVQPYNSMLTLKRLTT 197
            :||.|.||:.||||||||:.::.::.:.:|.:::.||||.|: .::||.||:|||:.|::.:|..
Human   182 QGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLVE 245

  Fly   198 AADSVVVLDNTALNRIACDRLHIQNPSFSQINNLVSTIMSVSTTTLRYPSYMNNNLIGLTAPLIP 262
            ..|....:||.||..|....|.:..|::..:|:|||..||..||.||:|..:|.:|..|...::|
Human   246 NTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVP 310

  Fly   263 TPQLHFLMTGYTPLTSDSDIHTQQLVNVRKTTVLDVMRRLLQPKNMMVSTGPDKSNHHCYISILN 327
            .|:|||.|.|:.||||..   :||   .|..||.::.:::...||||.:..|   .|..|:::..
Human   311 FPRLHFFMPGFAPLTSRG---SQQ---YRALTVPELTQQMFDAKNMMAACDP---RHGRYLTVAA 366

  Fly   328 IIQGEVDPTQVHKSLQRIRDRKMAQFIPWGPTSIQVALSRSSPYVQSNHRVSGLMLANHTSICSL 392
            :.:|.:...:|.:.:..::.:..:.|:.|.|.:::.|:....|   ...:::...:.|.|:|..|
Human   367 VFRGRMSMKEVDEQMLSVQSKNSSYFVEWIPNNVKTAVCDIPP---RGLKMAATFIGNSTAIQEL 428

  Fly   393 FERALNQYDKLRKRGAFLDQFRREDIFKDDLNELDESRETVDCLV---QEYEAATREDYMQFSVK 454
            |:|...|:..:.:|.|||..:..|.:   |..|..|:...::.||   |:|:.||.|:       
Human   429 FKRISEQFTAMFRRKAFLHWYTGEGM---DEMEFTEAESNMNDLVSEYQQYQDATAEE------- 483

  Fly   455 RGNGPVDSKSED 466
               |..:.::|:
Human   484 ---GEFEEEAEE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gammaTub23CNP_476804.1 gamma_tubulin 4..440 CDD:276957 151/439 (34%)
TUBB4ANP_001276052.1 PLN00220 52..478 CDD:215107 152/441 (34%)

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