DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and AT1G51570

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_175568.1 Gene:AT1G51570 / 841582 AraportID:AT1G51570 Length:776 Species:Arabidopsis thaliana


Alignment Length:129 Identity:24/129 - (18%)
Similarity:42/129 - (32%) Gaps:38/129 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 DRNSIVRCEFRFPDGLCCQQRVETPLERGWNVRRH-----------CAKHSTRQGAVET------ 140
            ::|.:.:..:..|:..|........|.....:::|           |.|.|.:...:..      
plant    97 NKNQVKKKVYICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNK 161

  Fly   141 ---QRTVRVANFCDCPYEGQCLLRKDP--------EYLPTLRSK---DPIPAVSDLSLSQVSRT 190
               .|..|    |||   |....|||.        :.|....||   .|.|..::.:::.|:.|
plant   162 ICGSREFR----CDC---GTLFSRKDSFISHRSFCDVLAEESSKFFSVPSPLAANSTIATVTDT 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 14/87 (16%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031
C2B_Synaptotagmin-1 326..461 CDD:176047
AT1G51570NP_175568.1 C2B_MCTP_PRT_plant 40..164 CDD:176024 8/66 (12%)
C2C_MCTP_PRT_plant 202..352 CDD:175986 4/17 (24%)
C2D_MCTP_PRT_plant 364..493 CDD:176025
PRT_C 621..776 CDD:337028
Blue background indicates that the domain is not in the aligned region.

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