DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and NTMC2T2.1

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_172041.2 Gene:NTMC2T2.1 / 837052 AraportID:AT1G05500 Length:560 Species:Arabidopsis thaliana


Alignment Length:539 Identity:132/539 - (24%)
Similarity:220/539 - (40%) Gaps:127/539 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PASEPAADLESVDQKLEETHHSKFR---EVDRQEQEVLAEKAAEAASQ-RIAQVESTTRSATTEA 79
            |...|:..:.|..|||...:|...:   .||....|::.........| |.|.|.|.|.|..|..
plant    56 PEFYPSWVVFSERQKLTWLNHHLTKIWPYVDEAASELIKASVEPVLEQYRPAIVASLTFSKLTLG 120

  Fly    80 QESTT-TAVPVIKKIEHVGE---VVTEVIAERTGLP--TWGV-----VAIIILV----FLVVFGI 129
            ..:.. |.|.||.     |:   :..|:..:..|.|  ..||     |::.|.|    |..||.:
plant   121 TVAPQFTGVSVID-----GDKNGITLELDMQWDGNPNIVLGVKTLVGVSLPIQVKNIGFTGVFRL 180

  Fly   130 I----------FFCVRRFLKKRRTKDGKGK-KGVDMKSVQLLGSAYKEKVQPDMEE-LTENAEE- 181
            |          |..|...|::::..|...| .|.|:.::..|..|.:|.::..:|: :|....: 
plant   181 IFRPLVEDFPCFGAVSVSLREKKKLDFTLKVVGGDISAIPGLSEAIEETIRDAVEDSITWPVRKV 245

  Fly   182 -----GDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLLPDKK 241
                 ||..|.:. :.:|.|..||             :||:.|...|:.|.|||:.|:::.|.::
plant   246 IPIIPGDYSDLEL-KPVGMLEVKL-------------VQAKNLTNKDLVGKSDPFAKMFIRPLRE 296

  Fly   242 KKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQ 306
            |...:|.....|:|::||.|.|   ...||..:.||..|:|.:.....:.||..::.||.::..:
plant   297 KTKRSKTINNDLNPIWNEHFEF---VVEDASTQHLVVRIYDDEGVQASELIGCAQIRLCELEPGK 358

  Fly   307 TIEEWRDLV-SVEGEGGQEKLGDICFSLRYVP--------------------------------- 337
            ..:.|..|| .:|.:...:..|::...|.|:|                                 
plant   359 VKDVWLKLVKDLEIQRDTKNRGEVHLELLYIPYGSGNGIVNPFVTSSMTSLERVLKNDTTDEENA 423

  Fly   338 ---------TAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYN 393
                     ..|.|:|.::.|:.:...|:.|.:||||.:::.::|   .|.||.:...:|||.:|
plant   424 SSRKRKDVIVRGVLSVTVISAEEIPIQDLMGKADPYVVLSMKKSG---AKSKTRVVNDSLNPVWN 485

  Fly   394 ESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTEL---RHWSDMLASPRRPIA 455
            ::|.|.|  |......||:.|.|:|..| .:.||||||    |.|.:   ..:.|          
plant   486 QTFDFVV--EDGLHDMLVLEVWDHDTFG-KDYIGRCIL----TLTRVIMEEEYKD---------- 533

  Fly   456 QWHTLKDPEETDEILKNMK 474
             |:.| |..:|.::..::|
plant   534 -WYPL-DESKTGKLQLHLK 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 32/125 (26%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 35/124 (28%)
C2B_Synaptotagmin-1 326..461 CDD:176047 42/179 (23%)
NTMC2T2.1NP_172041.2 SMP_SYT 60..248 CDD:439233 46/192 (24%)
COG5038 71..>542 CDD:227371 125/514 (24%)

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