DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and syt15

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_073774788.1 Gene:syt15 / 798021 ZFINID:ZDB-GENE-090527-2 Length:435 Species:Danio rerio


Alignment Length:311 Identity:91/311 - (29%)
Similarity:150/311 - (48%) Gaps:33/311 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 LGSAYKEKVQPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDM 224
            |||     ::||:.:|.|...|....|..:.    ||.|.|.|..:...|.|::::|..||....
Zfish   138 LGS-----IRPDLYQLPEEPSEWALPDGSAV----RLWFALRYQQDKEQLVVSLLRAANLPTQCQ 193

  Fly   225 GGTSDPYVKVYLLP-DKKKKFETKVHRKTLSPVFNETFTFK-SLPYADAMNKTLVFAIFDFDRFS 287
            ...:  .||:.||| |.::..:.|..||...|.||:||.|: |....|..  :|..::|..|...
Zfish   194 RNIT--LVKLQLLPSDDRRHRQAKARRKGCHPQFNDTFVFQVSNSCVDQC--SLNMSLFTVDHQK 254

  Fly   288 KHDQIGEVKVPLCTIDLAQTI--EEWRDLVSVEGEGGQ--EKLGDICFSLRYVPTAGKLTVVILE 348
            ||..:|::.:||...:|.:..  .:||||   :.|..|  .|.|||..||.|..:..:||||:|.
Zfish   255 KHHLMGQILIPLICSELKEAAGKVQWRDL---DNESDQPLSKNGDIQVSLNYNQSLHRLTVVVLR 316

  Fly   349 AKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVT 413
            |:.|:......:.   .|:.:..:.:.::.|.|::.|.. :|.:||..:|.:...|:...||.:.
Zfish   317 ARGLQCCSEAAVC---AKVCLKIHTQVVRNKWTTVAKGN-SPSFNEKLTFRLLPMQLDTACLSLQ 377

  Fly   414 VVDYDRIGTSEPI--GRCILG--CMGTGTELRHWSDMLASPRRPIAQWHTL 460
            :   .:..|.:|:  ...::|  ....|.||.||:||::.|:..:.|||.|
Zfish   378 I---QQPSTEKPVLLAIVVIGPFMYARGRELEHWNDMVSKPQELVRQWHPL 425

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity