DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and Tc2n

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_083200.1 Gene:Tc2n / 74413 MGIID:1921663 Length:489 Species:Mus musculus


Alignment Length:368 Identity:83/368 - (22%)
Similarity:149/368 - (40%) Gaps:64/368 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 RRFLKKRRTKDGKGKKGVDMKSVQLLGSAYKEKVQPDMEELTENAE------------------- 180
            ||||....||...|.. .|:::.:|.||:...|   .|.:||.:::                   
Mouse   141 RRFLPHCETKQLYGSV-CDLRTSKLPGSSGLSK---SMLDLTTSSQRFIQRHDSFSSVPSSSSSR 201

  Fly   181 ---------------EGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEEL--PALDMGGTS 228
                           .|||.|      |||||.||.|:.::..:.:||:|..::  |: ..|.|.
Mouse   202 KNSQGSNRSLDTITLSGDERD------LGRLNVKLFYNSSAEQIWITVLQCRDISWPS-SYGDTP 259

  Fly   229 DPYVKVYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIG 293
            ...:|..|...|...|::.....:.:..|.|||.| ::...:.....|.|.|  ..:..|...||
Mouse   260 TISIKGILTLSKPVHFKSSAKEGSNAIEFMETFVF-AIKLQNLQAVRLAFKI--QTQTPKKKTIG 321

  Fly   294 EVKVPLCTIDLAQTIEEWRDLVS---VEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKM 355
            |..:.|.|:. .|.:|...::::   :.....:.:|| .||.    ....::.:.||||:.|...
Mouse   322 ECSLSLRTLS-TQEMEYSLEIIAPSKISVCQAELELG-TCFQ----AVNSRIQLQILEAQYLPSS 380

  Fly   356 DVGGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPY-YNESFSFEVPFEQIQK-ICLVVTVVDYD 418
            ........:||:.:..:|:.:.||||.:.|.:.... :.|:..|  |..|.:| |..::.:....
Mouse   381 STPLTLSFFVKVGMFSSGELIYKKKTRLLKASSGRVKWGETMIF--PLIQTEKEIVFLIKLYSRS 443

  Fly   419 RIGTSEPIGRCILGCMGTGTE-LRHWSDMLASPRRPIAQWHTL 460
            .:.....:|:..:.......| :..|.:.:.:|.:.:.:||.|
Mouse   444 SVRRKHFVGQLWISEDSNNIEAVNQWKETITNPEKVVIKWHKL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 9/25 (36%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 34/125 (27%)
C2B_Synaptotagmin-1 326..461 CDD:176047 30/138 (22%)
Tc2nNP_083200.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..214 0/24 (0%)
C2A_Tac2-N 239..341 CDD:176066 26/106 (25%)
C2B_Tac2-N 352..486 CDD:176074 29/140 (21%)
Nuclear localization signal 446..448 0/1 (0%)

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