DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and SYT13

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_065877.1 Gene:SYT13 / 57586 HGNCID:14962 Length:426 Species:Homo sapiens


Alignment Length:321 Identity:94/321 - (29%)
Similarity:148/321 - (46%) Gaps:38/321 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 SAYKEKVQPDMEELTENA--------EEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEE 218
            |..|.:|..::..|.:|.        |..:.|...|..:..:|::.|:||.....|.||.::|  
Human   120 SRLKRQVTEELFILPQNGVVEDVCVMETWNPEKAASWNQAPKLHYCLDYDCQKAELFVTRLEA-- 182

  Fly   219 LPALDMGGTSDPYVKVYLLPD----------KKKKFETKVHRKTLSPVFNETFTFKSLPYADAMN 273
             ...:..|..|.||:..:...          ||::..|......:.|:..|     .||.|    
Human   183 -VTSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEE-----ELPTA---- 237

  Fly   274 KTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDL--VSVEGEGGQEKLGDICFSLRYV 336
             ||...:...||||:|...||:::.|....:.....:|.:|  .:.|...|   .|::..|:.|:
Human   238 -TLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTSAKEPSAG---AGEVLLSISYL 298

  Fly   337 PTAGKLTVVILEAKNLKKMDVGGL--SDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFE 399
            |.|.:|.||:::||||.......|  .|..||:.:....::||||:|...|..:||.:||...||
Human   299 PAANRLLVVLIKAKNLHSNQSKELLGKDVSVKVTLKHQARKLKKKQTKRAKHKINPVWNEMIMFE 363

  Fly   400 VPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTL 460
            :|.:.:|...:.:.|:..|..|.|..:|.|.||...:|:|..||.:||.:|||.||.||.|
Human   364 LPDDLLQASSVELEVLGQDDSGQSCALGHCSLGLHTSGSERSHWEEMLKNPRRQIAMWHQL 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 32/135 (24%)
C2B_Synaptotagmin-1 326..461 CDD:176047 52/137 (38%)
SYT13NP_065877.1 C2A_Synaptotagmin-13 160..277 CDD:176059 31/129 (24%)
C2B_Synaptotagmin-13 288..425 CDD:176052 52/137 (38%)
Blue background indicates that the domain is not in the aligned region.

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