DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and syt13

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:XP_017212345.3 Gene:syt13 / 550345 ZFINID:ZDB-GENE-050417-135 Length:467 Species:Danio rerio


Alignment Length:298 Identity:82/298 - (27%)
Similarity:150/298 - (50%) Gaps:11/298 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 QPDMEELTENAEEGDEEDKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVK 233
            |...:|:..::|:.......|.....:|:|.:.....|..|.:.:::||.: :::.|  .:.|:.
Zfish   173 QASADEIPCSSEQTGAMTTSSSILYPKLHFSISLHKESGELHINIVEAENI-SVEAG--CEGYIS 234

  Fly   234 -VYLLPDKKKKFETKVHRKTLSPVFNETFTFKSLPY-----ADAMNKTLVFAIFDFDRFSKHDQI 292
             ...:.:::|...|.||:..:...:.|...| :||.     .|:::..:..::...||||.:..:
Zfish   235 GCVSVSEEQKHAHTAVHKLAVHVQWGEELVF-ALPMESTEDTDSLDGEVALSLHCCDRFSHNSTL 298

  Fly   293 GEVKVPLCTIDLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDV 357
            |.::..|..:.:....:.|.||...:.| .....|::..||.|:|.|.:|.||:::|:.|:...:
Zfish   299 GMMRFKLADVSMMLDADCWVDLQPPKQE-VTSSTGELLLSLSYLPAANRLGVVVMKARGLQSDKL 362

  Fly   358 GGLSDPYVKIAIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGT 422
            ....|..||:.:.....:||||:|...|..:||.:||....|:|.|.:.|..:.:.|::....||
Zfish   363 KDNIDLSVKLTLKHQNAKLKKKQTRRVKHKMNPVWNEMMMLELPSELLAKSSVDLEVLNLASPGT 427

  Fly   423 SEPIGRCILGCMGTGTELRHWSDMLASPRRPIAQWHTL 460
            ..|:|||:||...:||.|:||..||.:||:.||.||.|
Zfish   428 LLPLGRCMLGLQTSGTGLQHWKQMLDNPRKQIAMWHPL 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 26/129 (20%)
C2B_Synaptotagmin-1 326..461 CDD:176047 51/135 (38%)
syt13XP_017212345.3 C2A_Synaptotagmin-13 198..320 CDD:176059 24/125 (19%)
C2B_Synaptotagmin-13 331..466 CDD:176052 51/135 (38%)
Blue background indicates that the domain is not in the aligned region.

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