DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt1 and Syt5

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_062223.1 Gene:Syt5 / 54309 RGDID:3806 Length:386 Species:Rattus norvegicus


Alignment Length:362 Identity:194/362 - (53%)
Similarity:269/362 - (74%) Gaps:7/362 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 LPTWGVVAIIILVFLVVFGIIFFCVRRFLKKRRTKDGKGKKGVDMKSVQLLGSAYKEKVQPDMEE 174
            :|.|.:..|::...|:||...|...|:..::|..|..:.:..|.::.|:.||.:|.:||||::||
  Rat    27 VPAWVLATILLGSGLLVFSSCFCLYRKRCRRRMGKKSQAQAQVHLQEVKELGRSYIDKVQPEIEE 91

  Fly   175 LTENAEEGDEE--DKQSEQKLGRLNFKLEYDFNSNSLAVTVIQAEELPALDMGGTSDPYVKVYLL 237
            |..:.....::  ||   .:||||.:.|:|||.:..|.|.::|||.|.|||:||:|||||.||||
  Rat    92 LDPSPSMPGQQVLDK---HQLGRLQYSLDYDFQTGQLLVGILQAEGLAALDLGGSSDPYVSVYLL 153

  Fly   238 PDKKKKFETKVHRKTLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTI 302
            |||:::.||||||:||:|.|.|||.|| :||.:...:.||.|::||||||::|.||||:||:.::
  Rat   154 PDKRRRHETKVHRQTLNPHFGETFAFK-VPYVELGGRVLVMAVYDFDRFSRNDAIGEVRVPMSSV 217

  Fly   303 DLAQTIEEWRDLVSVEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKI 367
            :|.:.::.||:| .|..:..||||||||||||||||||||||::||||||||||||||||||||:
  Rat   218 NLGRPVQAWREL-QVAPKEEQEKLGDICFSLRYVPTAGKLTVIVLEAKNLKKMDVGGLSDPYVKV 281

  Fly   368 AIMQNGKRLKKKKTSIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILG 432
            .::|.||:::||||:|||.||||||||:||||||.:|:||:.:.:||:|||::|.:|.|||..:|
  Rat   282 HLLQGGKKVRKKKTTIKKNTLNPYYNEAFSFEVPCDQVQKVQVELTVLDYDKLGKNEAIGRVAVG 346

  Fly   433 CMGTGTELRHWSDMLASPRRPIAQWHTLKDPEETDEI 469
            ....|..||||:||||:|||||||||:|:.|:....|
  Rat   347 TAVGGAGLRHWADMLANPRRPIAQWHSLRPPDRARPI 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 12/50 (24%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 68/123 (55%)
C2B_Synaptotagmin-1 326..461 CDD:176047 95/134 (71%)
Syt5NP_062223.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Syt1_2_N 6..76 CDD:425364 12/48 (25%)
C2A_Synaptotagmin-1-5-6-9-10 108..230 CDD:176031 68/123 (55%)
C2B_Synaptotagmin-1 240..374 CDD:176047 95/133 (71%)
Blue background indicates that the domain is not in the aligned region.

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