DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt1 and Syt17

DIOPT Version :10

Sequence 1:NP_523460.2 Gene:Syt1 / 33473 FlyBaseID:FBgn0004242 Length:474 Species:Drosophila melanogaster
Sequence 2:NP_001390574.1 Gene:Syt17 / 110058 MGIID:104966 Length:474 Species:Mus musculus


Alignment Length:349 Identity:133/349 - (38%)
Similarity:203/349 - (58%) Gaps:35/349 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 VDMKSVQL-LGSAYKEKVQPD------------------MEELTENAEEGD---EEDKQSEQKLG 194
            :|:|.|:. :.||.||.:||.                  :..|..|.::.|   :|:..|:.:||
Mouse   122 IDIKPVEFGVLSAKKESIQPSVLRRTYTPDDYFRKFEPRLYSLDSNLDDVDSLTDEEIMSKYQLG 186

  Fly   195 RLNFKLEYDFNSNSLAVTVIQAEELP--------ALDMGGTSDPYVKVYLLPDKKKKFETKVHRK 251
            .|:|..:||...|.|.|.||:|.:||        ..|| ..|:||||:.||||:|...:|.|.||
Mouse   187 MLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDM-AHSNPYVKICLLPDQKNSKQTGVKRK 250

  Fly   252 TLSPVFNETFTFKSLPYADAMNKTLVFAIFDFDRFSKHDQIGEVKVPLCTIDLAQTIEEWRDLVS 316
            |..|||.|.:||: :|:.:|..:||:..:.|||:||:|..||:|.||||.:||.:....|:.|  
Mouse   251 TQKPVFEERYTFE-IPFLEAQRRTLLLTVVDFDKFSRHCVIGKVAVPLCEVDLVKGGHWWKAL-- 312

  Fly   317 VEGEGGQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIAIMQNGKRLKKKKT 381
            :.....:.:||::..||.|:|:||:|.|.|:.||.|.:.||...|||:|||.::...|.:|.|||
Mouse   313 IPSSQNEVELGELLLSLNYLPSAGRLNVDIIRAKQLLQTDVSQGSDPFVKIQLVHGLKLVKTKKT 377

  Fly   382 SIKKCTLNPYYNESFSFEVPFEQIQKICLVVTVVDYDRIGTSEPIGRCILGCMGTG-TELRHWSD 445
            |..:.|::|:|||||||:||.|:::...||.||..::...:::.|||.::|...:| :|..||..
Mouse   378 SFLRGTIDPFYNESFSFKVPQEELENASLVFTVFGHNMKSSNDFIGRIVIGQYSSGPSESNHWRR 442

  Fly   446 MLASPRRPIAQWHTLKDPEETDEI 469
            ||.:.|..:.|||:|:...|.|.:
Mouse   443 MLNTHRTAVEQWHSLRSRAECDRV 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt1NP_523460.2 Syt1_2_N 62..161 CDD:425364 3/9 (33%)
C2A_Synaptotagmin-1-5-6-9-10 192..316 CDD:176031 58/131 (44%)
C2B_Synaptotagmin-1 326..461 CDD:176047 58/135 (43%)
Syt17NP_001390574.1 C2A_Synaptotagmin-15-17 186..314 CDD:176036 57/131 (44%)
C2B_Synaptotagmin-17 323..457 CDD:176055 57/133 (43%)

Return to query results.
Submit another query.