DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33552 and rfwd3

DIOPT Version :10

Sequence 1:NP_001014488.1 Gene:CG33552 / 3346220 FlyBaseID:FBgn0053552 Length:157 Species:Drosophila melanogaster
Sequence 2:XP_017948850.2 Gene:rfwd3 / 100492921 XenbaseID:XB-GENE-6041816 Length:752 Species:Xenopus tropicalis


Alignment Length:96 Identity:28/96 - (29%)
Similarity:45/96 - (46%) Gaps:5/96 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 ITKELRLRLAAQDAIANQAENLSMKRKKIAEENK---CYICKWNYEVTGDHRPVSIKCGHLFGAN 116
            :.:.:.|.|..|.......:.||..:....||::   |.||...:...|.||..:::||||||..
 Frog   228 VPESVTLPLQTQTKQKTPVKQLSPVKTLPPEEDEGDTCAICFEPWTNAGQHRLSALRCGHLFGFT 292

  Fly   117 CILHYLQRNKT-CPICKSQMIRCMDVRIIIA 146
            ||..:|:.... ||.|..:..|. |:.::.|
 Frog   293 CIERWLKGGAAKCPQCNKKAKRA-DIVVLYA 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33552NP_001014488.1 RING_Ubox 85..144 CDD:473075 22/62 (35%)
rfwd3XP_017948850.2 mRING-C3HGC3_RFWD3 261..321 CDD:438114 20/60 (33%)
WD40 <473..572 CDD:475233
WD40 repeat 477..514 CDD:293791
WD40 repeat 520..558 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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