DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obsc and bt

DIOPT Version :10

Sequence 1:NP_001097440.1 Gene:Obsc / 3346201 FlyBaseID:FBgn0053519 Length:4218 Species:Drosophila melanogaster
Sequence 2:NP_001162825.1 Gene:bt / 43814 FlyBaseID:FBgn0005666 Length:8933 Species:Drosophila melanogaster


Alignment Length:5781 Identity:1020/5781 - (17%)
Similarity:1718/5781 - (29%) Gaps:2322/5781 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 FVSRDYQAQS-----LATDEISVSRGDLVELISSKASE-----------KSRCFVRMFDSGDSPK 57
            ||.|..::||     .||:|:.....:|...:..|..:           |..|.::.....|   
  Fly  3559 FVMRAQRSQSGKYIIKATNEVGEDEAELEVTVLGKPGKPKGPLQVNDITKHSCKLKWEKPDD--- 3620

  Fly    58 EGWVPIDILEFN----------PTMSSSN------GKESGDA-EFRKLTILRELVETEEEFSRDL 105
            :|..|||..|..          |...|:.      |...|.| :||...:      .:|..|.||
  Fly  3621 DGGSPIDYYEIEKLDPHTGQWLPCGKSTEPEAKVIGLHEGKAYKFRVRAV------NKEGESEDL 3679

  Fly   106 LHVVEKYIKGIDKPVVPRSVRDNKDIIFCNFLQIAEFHNNVLKEGLKCYSNQPNMVAKTFLRLER 170
                     ..:||::.::..|..|                          :|.....|      
  Fly  3680 ---------ETEKPIIAKNPYDEPD--------------------------RPGKPEPT------ 3703

  Fly   171 DFDKHVVYCQNEPLAQDYLGSSPDAKKYFQELSKQLGDDKSLAEHLKLPIQRINDYQLLFKDFIK 235
            ::||..|....:|...|  |.:| .:||..::..:.|  ::..:...:|..:.|......::..:
  Fly  3704 NWDKDFVDLAWDPPKND--GGAP-IQKYVIQMRDKSG--RAWVDSATVPGDKCNGTVTGVEEGHE 3763

  Fly   236 YSLSL----KENVKDLERALELMLSVPSRAYDNRFLS---SIEGCRGNIYKLGRLLLH------- 286
            |...:    |....|.....:.:::.|      |||.   ..:..:..|.:.|: :||       
  Fly  3764 YEFRIVAVNKAGPSDPSDVSKSVIAKP------RFLKPHIDRKNLQKKIMRSGQ-MLHIDALIKA 3821

  Fly   287 ------AWC-NVVDKEGKAH------DRYCFLFKSRILVTKVRKISENRSVFIL--QNIVKLPLC 336
                  .|. |..:.:...|      |     :|:..::.||::  .:|.::|:  :|.......
  Fly  3822 EPPAKVTWTYNKTEIKTSDHIKIENED-----YKTTFIMPKVKR--ADRGIYIVTAKNDSGSDTV 3879

  Fly   337 NIELK----------------ADEKQIHLSLKAPEANSFLPID-----------------IKPHG 368
            .:||:                ...:.:||..:.||.:...||:                 :....
  Fly  3880 EVELEVLCKPSKPKGPLAVSNVTAETLHLKWEKPEDDGGDPIEQYLVERMDTETGRWVPVLTTKT 3944

  Fly   369 PEAHLTWFNEISSHINQDVTLQEHNADDLKVDASQIASESE-LILHLPQRAEAHDPNLSVRPSDV 432
            |||.:|...|...::             .:|.|.....||| |:..:|.:|:        .|.|.
  Fly  3945 PEADVTGLTEGKEYL-------------FRVKAVNSEGESEPLVTDIPTKAK--------NPFDA 3988

  Fly   433 AENYFLSKETKERLQHEQQELLKLEQEAIELYKKQQSSKSVSSKTESVEITSSQVKSSSEVRKVV 497
            |:.     ..|.::.........|:..|.|    .....|::.     .|...:..::.:.:|.:
  Fly  3989 ADT-----PGKPQIVDWSGNHCDLKWRAPE----DDGGASITG-----YIVERKDPNTGKWQKAL 4039

  Fly   498 SPPPPP-QAQVKEVTP-------VKVVSSPPPPKEITPAKVATPPPQPQVVTSPVKEVAPPPQPR 554
            ....|. :|:|.::..       :..|:.....|          |.:|....:.....|||...|
  Fly  4040 ETSTPDCKARVNDLIAGNKYQFRIMAVNKAGKSK----------PSEPSDQMTAKDRFAPPKIDR 4094

  Fly   555 AVASPAKEVTPSQSEPVKAPSPIK-EVRKEVPPSAS----HSK------------EVEALVATEI 602
               :..|::|      :||...|: :::....|.|:    |:|            ::|:     .
  Fly  4095 ---TNIKDIT------IKAGQHIRFDIKVSGEPPATKVWLHNKARLENDDSNYNIDMES-----Y 4145

  Fly   603 RESLTETRSTVVESGQSSEIREEIVVTEESSLEGKQVVALEREPSPCSIP-----------KIQV 656
            |..||...|....||:.:...|.....:|:|.|   |:.|:: |.|...|           |::.
  Fly  4146 RTKLTVPISKRFHSGKYTLKAENESGRDEASFE---VIVLDK-PGPPEGPLRVTDVHKEGCKLKW 4206

  Fly   657 YRPVECENPVVTKHKPIELKDIVG--------YSESL--------------------RDGDTAP- 692
            ..|:: :..:...|..||..|:..        :.||.                    .:|::.| 
  Fly  4207 NAPLD-DGGLPIDHYIIEKMDVESGRWLPSGRFKESFAELNNLEPSHEYKFRVLAVNTEGESEPL 4270

  Fly   693 -------------AGGSPGRQQGYSANITDHASLTIWNNRLANIAGDRSGANQHLQQSGPPPPPI 744
                         ..|.||..:....: .||..| :|.                        |||
  Fly  4271 TGEQSVIAKNPFDEPGKPGTPEAVDWD-KDHVDL-VWR------------------------PPI 4309

  Fly   745 PPNFTRMPGFFQ----------------PLPLIAYE--TTIEIL--------IVKARPPSPPPPP 783
            ....:.:.|:..                .:|.:..|  .|:..|        .|||...:.|..|
  Fly  4310 NDGGSPITGYVVEKREKGTDKWIKGTEITIPCLGEECKATVPTLNENCEYEFRVKAINAAGPGEP 4374

  Fly   784 PPTIKRVLVHTESLEQK-------TQNFFEG--------IYDAASSDTSLRNAKQKIRSIKSTVL 833
            ....|.::.....|..|       |.||..|        |....:.|.:.   .|..:|:::|..
  Fly  4375 SDASKPIITKPRKLAPKIDRKNIRTYNFKSGEPIFLDINISGEPAPDVTW---NQNNKSVQTTSF 4436

  Fly   834 KSKDSTNY----------AQDT-VQKAKARDF---------LHIFTPPVKKRPIYEIVEEPVNIF 878
            ...::..|          .:|| :.|..|.:|         ::|.|.|.|.       |.|:.:.
  Fly  4437 SHIENLPYNTKYINNNPERKDTGLYKISAHNFYGQDQVEFQINIITKPGKP-------EGPLEVS 4494

  Fly   879 ELEGDYTESIADDFREPSADFEARGQSVGGMDDYYSGYSRASTRRYETKTRDYDRGTSYDSTVER 943
            |:..|..:.   .:::|..|        ||          .....|..:..|.|.|.        
  Fly  4495 EVHKDGCKL---KWKKPKDD--------GG----------EPVESYLVEKFDPDTGI-------- 4530

  Fly   944 SQYGISSRRDRSSVDKVEARSSLLATGRTESRAASRAESRAESRASYSV------AESRAGIRSS 1002
                                  .|..||::.             ..|:|      .:.:..:::.
  Fly  4531 ----------------------WLPVGRSDG-------------PEYNVDGLVPGHDYKFRVKAV 4560

  Fly  1003 SRLQEDRPLRSVDKPVVVKMLKSVQVEPGETAHFEIQFKDQPGLVTWLKDNKPLEDRLADRITQT 1067
            ::..|..||.::.. ::.|...||..:||           .|....|.. || :|....:..:..
  Fly  4561 NKEGESEPLETLGS-IIAKDPFSVPTKPG-----------VPEPTDWTA-NK-VELAWPEPASDG 4611

  Fly  1068 AAPMNSYRLDIKN--------CSETDAGTYTIRAQSASETTTVSAQLAV----GQAPGHDETKTN 1120
            .:|:..|.:::|:        ..||::.|.|...|...|......::..    |.:...|.:|..
  Fly  4612 GSPIQGYIVEVKDKYSPLWEKALETNSPTPTATVQGLIEGNEYQFRVVALNKGGLSEPSDPSKIF 4676

  Fly  1121 T-EPAFLV------SLKDAEMIENTLFRFMVKIIGDPKPRVKFYKDEKEILETNDRIQIIRDKDY 1178
            | :|.:|.      :|::..:...|..:....|.|:|.|:|: :|.....|::...: .|...||
  Fly  4677 TAKPRYLAPKIDRRNLRNITLSSGTALKLDANITGEPAPKVE-WKLSNYHLQSGKNV-TIETPDY 4739

  Fly  1179 LGFYELVIADVQKTDAGTYSCKATNKHGEANCEAIATTVEDK--NPFGALSGQILPAGEKPV-FQ 1240
              :.:|||...|::|:|.|...|||..|: :...:...:.||  .|.|.|  ||....::.. .:
  Fly  4740 --YTKLVIRPTQRSDSGEYLVTATNTSGK-DSVLVNVVITDKPSPPNGPL--QISDVHKEGCHLK 4799

  Fly  1241 WKRNGEE-FDPEERFKVLFGEDEDSLALVFQHVKPE-DAGIYTC--------VAQTSTGNISCSA 1295
            |||..:: ..|.|.|::      |.|       :|| ...|.:|        |...|.||     
  Fly  4800 WKRPSDDGGTPIEYFQI------DKL-------EPETGCWIPSCRSTEPQVDVTGLSPGN----- 4846

  Fly  1296 ELSVQGAIQTLNREPEKPTLVIEHREANASIGGSAILELQCKGFP-KP----AVQWKHD------ 1349
              ..:..:..:|.|.|...||          |..:|:.......| ||    |..|..|      
  Fly  4847 --EYKFRVSAVNAEGESQPLV----------GDESIVARNPFDEPGKPENLKATDWDKDHVDLAW 4899

  Fly  1350 -------GE-----VIQVDDRH-KFMYEDEESMSLVIKNV-----DTVDAGVY--TIEAINELGQ 1394
                   |.     :|:..|:: |:    |.::.:.....     |.|:...|  .:.|:|..|.
  Fly  4900 TPPLIDGGSPISCYIIEKQDKYGKW----ERALDVPADQCKATIPDLVEGQTYKFRVSAVNAAGT 4960

  Fly  1395 DESSIN---LVVKA---PPKIKK--ITDITCSAGETIKMEIEVEGFPQPTVQVTNNGKDVTAESN 1451
            .|.|.:   ::.||   ||.|.:  :.::...||::...:.:|.|.|.|..:.....|:|.::.|
  Fly  4961 GEPSDSTPPIIAKARNKPPIIDRSSLVEVRIKAGQSFTFDCKVSGEPAPQTKWLLKKKEVYSKDN 5025

  Fly  1452 VKISSSSIGKSLEKVVVEVKEIKLSQAGNYSIKATNDLSQTSEYWSCTVKSKP--------VIVK 1508
            ||:::......|     :|.....|.:|.|::.|.|...:.|.....||..||        |...
  Fly  5026 VKVTNVDYNTKL-----KVNSATRSDSGIYTVFAENANGEDSADVKVTVIDKPAPPNGPLKVDEI 5085

  Fly  1509 NFESEYIHGEKENVQMTVRIDAYPEAKLTWYHDETEIKITDSKYTVSSDGNAYTLKITGATRVDA 1573
            |.||..:|....:......||.|...||    |||..:...:..|   ||....||:.|.|....
  Fly  5086 NSESCTLHWNPPDDDGGQPIDNYVVEKL----DETTGRWIPAGET---DGPVTALKVGGLTPGHK 5143

  Fly  1574 GKYTVKATNEHGSA---TSSTQLLIKCAPEFTHKLKNITVAEGDSN-VELVVGVDAYPRPHAKWY 1634
            .|:.|:|.|..|::   |::..::.|...:...|....|:.:.|.. |:|     .:.||.|   
  Fly  5144 YKFRVRAKNRQGTSEPLTTAQAIIAKNPFDVPTKPGTPTIKDFDKEFVDL-----EWTRPEA--- 5200

  Fly  1635 IDGIE-----IDEKRNDF-----RHVEEGNDFKLIMN----QVATNMQGNYTCKIMNDYG----- 1680
             ||..     :.|||:.|     :..|..:|   |.|    .:...::..:..:.:|..|     
  Fly  5201 -DGGSPITGYVVEKRDKFSPDWEKCAEISDD---ITNAHVPDLIEGLKYEFRVRAVNKAGPGSPS 5261

  Fly  1681 -KLEDNCVVTVNCKPKVKRG-LKNVEVQEGKSFTLEVEVYSEPEAKIKWFKDGHEIYEDARIKIS 1743
             ..|.:.....|..||:.|. :.:::::.|..|..:|.|..||.....|..:|:.|....|:|||
  Fly  5262 DATETHVARPKNTPPKIDRNFMSDIKIKAGNVFEFDVPVTGEPLPSKDWTHEGNMIINTDRVKIS 5326

  Fly  1744 RDTQRIENYYLTLNLARTEDAGTYEMKATNFIGETTSTCKVAVLTSEALSLEQ------TVTK-T 1801
            ....|.:...|.   |:..|.|.|.:.|.|..|......||.:|  :|.|:.:      .|:| :
  Fly  5327 NFDDRTKIRILD---AKRSDTGVYTLTARNINGTDRHNVKVTIL--DAPSVPEGPLRNGDVSKNS 5386

  Fly  1802 LIATTEEPEEGAVPEIVH--VDVFQQHSYESVPLKYEVIATGIPKPEAIWYHD------------ 1852
            ::.....|::....||.|  |:.....:...||:. :...|.|.....|..||            
  Fly  5387 IVLRWRPPKDDGGSEITHYVVEKMDNEAMRWVPVG-DCTDTEIRADNLIENHDYSFRVRAVNKQG 5450

  Fly  1853 -------GKPIT-------PDK--HTAITVDGDHYKLEVQSLDLVDAG----EYKVVVQNKVGE- 1896
                   .:|||       |||  ....|..|.|:.....|....|.|    .|.:..:.|.|: 
  Fly  5451 QSQPLTTSQPITAKDPYSHPDKPGQPQATDWGKHFVDLEWSTPKRDGGAPISSYIIEKRPKFGQW 5515

  Fly  1897 -----------KSHQGELSLSGIAEYRKPILTQG-------PG------------------LKDI 1925
                       |:|..||:..|..|:|...:.:|       |.                  |.||
  Fly  5516 ERAAVVLGDNCKAHVPELTNGGEYEFRVIAVNRGGPSDPSDPSSTIICKPRFLAPFFDKSLLNDI 5580

  Fly  1926 KVNKGDKVCEPVVFTADPAPEIVLLKDGQPVVETNNVKLKVDKKDAENGLVQYTCTLNILEAEIK 1990
            .|:.|.::...:...|.|.|.|..|.:|:.:...:.         .|:||.|...|..|:.:...
  Fly  5581 TVHAGKRLGWTLPIEASPRPLITWLYNGKEIGSNSR---------GESGLFQNELTFEIVSSLRS 5636

  Fly  1991 DSGRYELKVKNKYG--------------------------------------------------- 2004
            |.|||.|.:||::|                                                   
  Fly  5637 DEGRYTLILKNEHGSFDASAHATVLDRPSPPKGPLDITKITRDGCHLTWNVPDDDGGSPILHYII 5701

  Fly  2005 ---ELVTSGWID----------------------------------------------------- 2013
               :|..|.|.|                                                     
  Fly  5702 EKMDLSRSTWSDAGMSTHIVHDVTRLVHRKEYLFRVKAVNAIGESDPLEAVNTIIAKNEFDEPDA 5766

  Fly  2014 ----------------------------------------------------------------- 2013
                                                                             
  Fly  5767 PGKPIITDWDRDHIDLQWAVPKSDGGAPISEYIIQKKEKGSPYWTNVRHVPSNKNTTTIPELTEG 5831

  Fly  2014 ------------------------VLAKPE------ISGLNDTKCLPGDTICFEALVQ--ANPKP 2046
                                    ::|||.      |:.||:.:...|  :.|...:.  ..|.|
  Fly  5832 QEYEFRVIAVNQAGQSEPSEPSDMIMAKPRYLPPKIITPLNEVRIKCG--LIFHTDIHFIGEPAP 5894

  Fly  2047 KVSWTRGNENLCNHE----------------NCE------------------------VIAD--- 2068
            :.:||..:..|.:::                ||:                        |:.|   
  Fly  5895 EATWTLNSNPLLSNDRSTITSIGHHSVVHTVNCQRSDSGIYHLLLRNSSGIDEGSFELVVLDRPG 5959

  Fly  2069 ----------------------------------------------------------------- 2068
                                                                             
  Fly  5960 PPEGPMEYEEITANSVTISWKPPKDNGGSEISSYVIEKRDLTHGGGWVPAVNYVSAKYNHAVVPR 6024

  Fly  2069 ----------------------------------------------VDADKYRLVFQSVSPCEDG 2087
                                                          .|:||..:..:...|..:|
  Fly  6025 LLEGTMYELRVMAENLQGRSDPLTSDQPVVAKSQYTVPGAPGKPELTDSDKNHITIKWKQPISNG 6089

  Fly  2088 -------------------------------------------KYTITATNSEGRAAVD-----F 2104
                                                       :|.|:|.|:.|.....     |
  Fly  6090 GSPIIGYDIERRDVNTGRWIKINGQPVPTAEYQDDRVTSNHQYQYRISAVNAAGNGKTSEPSAIF 6154

  Fly  2105 NLAVLVEKPTFIVQ---PESQSIHDYRPVSTKVLVHGVPLPTIEWFKDD------KPINYEAINK 2160
            |...|.|||.|...   .:...:....||:..:.:.|.|.|||||.:.|      |.|:||    
  Fly  6155 NARPLREKPRFYFDGLIGKRIKVRAGEPVNLNIPISGAPTPTIEWKRGDLKLEEGKRISYE---- 6215

  Fly  2161 PGKDKLYAKEDTKKGTDQIESVLDIKSFRENDVGAYTCVATNEIGVTKAPFK------------- 2212
                           |:...::..|......|.|.||..|.||.|...|..:             
  Fly  6216 ---------------TNSERTLFRIDDSNRRDSGKYTVTAANEFGKDTADIEVIVVDKPSPPEGP 6265

  Fly  2213 LAMLSLAPSFVK------KLDNALDV--------------------------------------- 2232
            |:....||..:.      |.|...|:                                       
  Fly  6266 LSYTETAPDHISLHWYSPKDDGGSDITGYIIEFTEFGVDDWKPVPGTCPNTNFTVKNLVEGKKYV 6330

  Fly  2233 --------------LQGEPLVLECCVD--GSP-LPTV---------------------------- 2252
                          |:|:|::.:...|  |:| .||:                            
  Fly  6331 FRIRAENIYGASEALEGKPVLAKSPFDPPGAPSQPTISAYTPNSANLEWHPPDDCGGKPITGYIV 6395

  Fly  2253 -------QWLKDGDEVKPSESIKISTNPDGLVKLEINSCQPNDSGAYKLIISNPHGEKVALCA-- 2308
                   :|:|..:...|:.|..:|...|| .:.|......|::|.     .:|......:.|  
  Fly  6396 ERRERGGEWIKCNNYPTPNTSYTVSNLRDG-ARYEFRVLAVNEAGP-----GHPSKPSDPMTAEH 6454

  Fly  2309 --------VAVKPE---------------------------EMQPKFLK--------PITSQTVV 2330
                    ...||:                           ||:||..|        ||.|....
  Fly  6455 QRYRPDPPEPPKPDRITRNGVTLSWRPPRTDGKSRIKGYYVEMRPKNGKDWKTVNDIPINSTVYT 6519

  Fly  2331 V---------------------------GEPLKLEAQ---------------------------V 2341
            |                           .:|:.:|.|                           .
  Fly  6520 VPSLKEGEEYSFRVVAENEVGRSDPSKPSQPITIEEQPNKPCMELGKVRDIVCRAGDDFSIHVPY 6584

  Fly  2342 TGFPAPEVKWYKDGMLLRPSPEINFINSPNGQIGLIIDAAQPLDAGVYKCLIANKGGEIEGVSKV 2406
            ..||.|...||.:..:|..:..:: .:..:....:::..::..|:|.|:..:.|..|.......|
  Fly  6585 LAFPKPNAFWYSNDNMLDDNNRVH-KHLTDDAASVVVKNSKRADSGQYRLQLKNTSGFDTATINV 6648

  Fly  2407 EIVPKESKPV-----------------------------FVAELQDA-----SSIEGFPV----- 2432
            .::.:.|.|.                             ::.|.::|     |.:..|..     
  Fly  6649 RVLDRPSPPTRLRADEFSGDSLTLYWNPPNDDGGSAIQNYIIEKKEARSSTWSKVSSFCTVPFVR 6713

  Fly  2433 --------KMDIKVVGNPK---------------------PKLQWFHNGHEIKPDASHIAIVENP 2468
                    :.|.:|:...|                     |......:|.:...|:..||..:..
  Fly  6714 IRNLVLNKEYDFRVIAENKYGQSDPANTSEPILARHPFDIPNTPGIPHGIDSTEDSITIAWTKPK 6778

  Fly  2469 DNSSS----LIIEKTAPGD-----------------------SGLYE--VIAQNPEGSTA--SKA 2502
            .:..|    .||||....|                       :..||  |.|.|..|.:|  ..:
  Fly  6779 HDGGSPITGYIIEKRLLSDDKWTKAVHALCPDLSCKIPNLIENAEYEFRVAAVNAAGQSAYSGSS 6843

  Fly  2503 KLYVAPKADETATEEAPQFVS--ALRDVNADEGQELVLSAPFISNPMPEVIWSKDGVTLTPNERL 2565
            .|....:     ...||:..|  ::||:....|.|..::.|:.::|.|...||.:|:.:.|.||:
  Fly  6844 DLIFCRR-----PPHAPKITSDLSIRDMTVIAGDEFRITVPYHASPRPTASWSLNGLEVIPGERI 6903

  Fly  2566 LMTCDGKHIGLTIKPAEAADSGNYTCLLANPLGEDSSACNANVRKVYKPP--------------- 2615
            ....:........|.|:..::|:||..|.|..|.|:::|:..|.....||               
  Fly  6904 KFDSNDYASMYYNKSAKRDETGSYTITLTNNKGSDTASCHVTVVDRPLPPQGPLNAYDITPDTCT 6968

  Fly  2616 ----------------------------------------------------------------- 2615
                                                                             
  Fly  6969 LAWKTPLDDGGSPITNYVVEKLDNSGSWVKISSFVRNTHYDVMGLEPHYKYNFRVRAENQYGLSD 7033

  Fly  2616 -----------------------------------VFTQKISD---------------------- 2623
                                               ::|:.:||                      
  Fly  7034 PLDIIEPIVAKHQFTVPDEPGQPKVIDWDSGNVTLIWTRPLSDGGSRIQGYQIEYRDILNDSSWN 7098

  Fly  2624 ----------------------QQQVFGNNA-------------------KIP-------VTVSG 2640
                                  :.::...||                   .:|       ||..|
  Fly  7099 AYDYIIKDTKYQLYNLINGSEYEFRIKAKNAAGLSKPSSPSLRFKLKGKFTVPSPPGAPQVTRVG 7163

  Fly  2641 VPYPDLEWYFQDKPI----------------------PKSEKYSIKNDGDHHMLIVNNCEKGDQG 2683
            ..|.||:|   :||:                      .|...|::.   |....::|..|.||. 
  Fly  7164 KNYVDLKW---EKPLRDGGSRITGYIIERRDIGGAVWVKCNDYNVL---DTEYTVMNLIEMGDY- 7221

  Fly  2684 VYKCIASNREGKDITQGRLDIVNEIKKHSRSEPPVFLKKIGDCDIYEG-----------MVAKF- 2736
            .::..|.|..|                  ||||.:....|..|::..|           .||.| 
  Fly  7222 EFRVFAVNSAG------------------RSEPSLCTMPIKVCEVLGGKKPDWITRLQDKVAPFG 7268

  Fly  2737 -----TACATGYPEPEVEWFKNDQKL-FPSDRFLIDIEPNGLLRLTIKNVTEYDVGRYSCRIFN- 2794
                 ...|:|.|.|...|.:|.::: ....|...| ..:|:.||.|.||...|.|.|:|...| 
  Fly  7269 KDYTLQCAASGKPSPTARWLRNGKEIQMNGGRMTCD-SKDGVFRLHISNVQTGDDGDYTCEAMNS 7332

  Fly  2795 ---------------------------PYGDDICHAELFYDS-------LDSQQKPLEDQYTD-- 2823
                                       |.||: ...::||..       |....:.:.|...|  
  Fly  7333 LGFVNTSGYLKIGSPPIINRCPSELKLPEGDN-SKIKIFYSGDQPLTVILKKNNEVICDSNDDTH 7396

  Fly  2824 -----FKKY---------KKSGAP-----------------------PPLSEGPI-ISRMTDRGL 2850
                 |..|         |..|.|                       |....||: ||.:.....
  Fly  7397 VKVNIFDDYVAIYIRNIVKSDGGPYQIEFTNESGSATGEFYVHITGMPSAPTGPMGISYINKNSC 7461

  Fly  2851 LLSWNPSVPLTPRYP-----ITYQIEMMDLPEGDWRTLRTGVRSCACDIRNLEPFRDYRFRVRVE 2910
            :|:|.|     |.|.     ..|.||..|:....|.|:.:..:..|.:::.|...::|.|||...
  Fly  7462 MLNWRP-----PSYDGGLKVSHYVIERKDVSSPHWITVSSTCKDTAFNVQGLIENQEYIFRVMAV 7521

  Fly  2911 NKFGVSDPSPYTQTYRQKLVPDPPKTYTYLPPGTDFRPETSPYFPK---DF---DIERPPHDG-- 2967
            |:.|:..|.......|.|...|||.     |||       ||...:   ||   :.|:|..||  
  Fly  7522 NENGMGPPLEGLNPIRAKDPIDPPS-----PPG-------SPQITEIGGDFVHLEWEKPESDGGA 7574

  Fly  2968 ----------------------------------LAQAPQFLLR-----------EQDISYGVK- 2986
                                              |.:..|:..|           |...|..|| 
  Fly  7575 HIQGYWIDKREVGSNTWQRVNATICAANQINCINLIEGRQYEFRIFAQNVAGLSTESSASQAVKI 7639

  Fly  2987 ----------------------DHNTELMWFVYGYPKPKMTYYFDDMLIESGGRFDQSYTRNGQA 3029
                                  :||.:....:.|.|||.:::|.....|.:|.|: ..|:.....
  Fly  7640 IDPQAASPPLIVKPLRDANCIQNHNAQFTCTINGVPKPTISWYKGAREISNGARY-HMYSEGDNH 7703

  Fly  3030 TLFINKMLDRDVGWYEAVATNEHGEARQRVRLEIAEHPRFLKRP---DETFIMARKNGRIEAKLV 3091
            .|.||.:...|...|...|.|:.|....|..|.|...|:....|   |..:....:|..|:....
  Fly  7704 FLNINDVFGEDADEYVCRAVNKAGAKSTRATLAIMTAPKLNVPPRFRDTAYFDKGENVVIKIPFT 7768

  Fly  3092 GIPLPEVHWFKDWKPIVDSSRIKISSYDPDIYVLSIHDSIIKDGGLYSISARNIAGSISTSVTVH 3156
            |.|.|.:||.:|.:.|.......:...:... ||.|.|....|.|.|.|:|.|..||.:..:.|.
  Fly  7769 GFPKPRIHWVRDGENIESGGHYTVEVKERHA-VLIIRDGSHLDSGPYRITAENELGSDTAIIQVQ 7832

  Fly  3157 IEENED----------------------------------------------------------- 3162
            |.:..|                                                           
  Fly  7833 ISDRPDPPRFPLIESIGTESLSLSWKAPVWDGCSDITNYYVERREHPLSSWIRVGNTRFTSMAVS 7897

  Fly  3163 ------QYIYKTYGRHPYVRS------------------------------KQLR---------- 3181
                  :|.::.:..:.|.||                              ::||          
  Fly  7898 GLTPGKEYDFRIFADNVYGRSDASDTSTLIKTKESVKKKPIERKWEIDANGRKLRGKADGPVKDY 7962

  Fly  3182 ----------------------YQDKYDIGDELGRGTQGITYHAVERSSGDNYAAK-IMYGRPEL 3223
                                  ..|:|||.:|:|.|..|:.:...|||:|:.:||| |.......
  Fly  7963 DSYVFDIYSKFVPQPVEISQQSVYDRYDILEEIGTGAFGVVHRCRERSTGNIFAAKFIPVSHSVE 8027

  Fly  3224 RPFMLNELEMMNTFNHKNLIRPYDAYDTDRSVTLIMELAAGGELVRDNLLRRDY-YTERDIAHYI 3287
            :..:..|:::||..:|:.||..:||::.|..:.||:|..:||||. :.:....| .||.::.:|:
  Fly  8028 KDLIRREIDIMNQLHHQKLINLHDAFEDDDEMILILEFLSGGELF-ERITAEGYVMTEAEVINYM 8091

  Fly  3288 RQTLWGLEHMHEMGVGHMGLTIKDLLISVVGGDIIKVSDFGLSRKINRHNLSTLDYGMPEFVSPE 3352
            ||...|:.||||..:.|:.:..::::........:|:.||||:.:::.:.:..:..|..||.:||
  Fly  8092 RQICEGIRHMHEQNIIHLDIKPENIMCQTRSSTNVKLIDFGLATRLDPNEVVKITTGTAEFAAPE 8156

  Fly  3353 VVNKEGVNFSHDMWTVGLITYVLLGGHNPFLGIDDRETLTKIREGRWDFKDEIWTHISDDGRDFI 3417
            :||:|.|.|..|||..|:::||||.|.:||.|.:|.:||..::...|||..|.:.:||::.:|||
  Fly  8157 IVNREPVGFYTDMWATGVLSYVLLSGLSPFAGDNDVQTLKNVKACDWDFDVESFKYISEEAKDFI 8221

  Fly  3418 SRLLLYSPEERMDVKTALKHPWFFMLDRPVYDHD---YQIGTDR-------LRNYYDHFRDW--- 3469
            .:||:.:.|:||.....|.|||.      ..||.   .:|..||       ||..|:.|..:   
  Fly  8222 RKLLVRNKEKRMTAHECLLHPWL------TGDHSAMKQEINRDRYLAYREKLRRKYEDFERFLLP 8280

  Fly  3470 ------YANAS---CKNY------FRRRRLSG----------CFQHPSKMVY-------PPGHVY 3502
                  |::..   .:.|      |.||:.:.          |::..|...|       .|...:
  Fly  8281 IGRLSEYSSLRKLLMEKYKIHDAVFDRRQAAPRFVIRPSSQFCYEGQSVKFYCRCIAIATPTLTW 8345

  Fly  3503 TPENTPEPLPEPRIRAKREEVVSKYLHPDY----------ELG--LIQSESHYQYGPDTYLLQL- 3554
            :..|.     |.|...|   .:.:|:..||          :.|  :|::|:||....:...|.: 
  Fly  8346 SHNNI-----ELRQSVK---FMKRYVGDDYYFIINRVKLDDRGEYIIRAENHYGSREEVVFLNVQ 8402

  Fly  3555 ---------RDVNFPVRLRE-----YMKVAHRRSPSFAL---------ND--------------S 3582
                     |..:.|||.||     :.:.....:|||..         .|              :
  Fly  8403 PLPKEQPRYRTESTPVRRREPLPYTFWQEESETAPSFTFLLRPRVMQARDTCKLLCCLSGKPVPN 8467

  Fly  3583 VDWSLPVIRERRRFT---------------DIMD-------------------EEID-------- 3605
            |.|    .::.|..:               :|:|                   :|.|        
  Fly  8468 VRW----YKDGRELSKYEYAMTHSDGVVTMEIIDCKPSDSGKYSCKATNCHGTDETDCVVIVEGE 8528

  Fly  3606 ----DERTRSRISMYAANESY---------------------SIRRLRTELGPRLDEYTEADAMI 3645
                ::...:...:|:.:..|                     |::......|.:::......:.|
  Fly  8529 WVTPEQAQLAHNFLYSGDRKYIEQPIKPAPLPIVTSRQYTSSSVQNTSEPQGDKVNVSNSNSSGI 8593

  Fly  3646 ETQRE---------GYP---------------------PFFREKPQTIAITENQPSHIHCFAVGD 3680
            ..:::         |.|                     |.|.:....:.|.:.:...:.|:..||
  Fly  8594 SNKKKYASNSLQAPGSPSRSRSATKELILPPDDSLMCKPEFTKPLHDLTIHDGEQLILTCYVKGD 8658

  Fly  3681 PKPCVQWFKNDMVLTESKRIKISVDEDGRSILRFEPALHFDVGVYKVVARNKVGQTVARCRIVVA 3745
            |:|.:.|.||...|:.|..:.:.. ::|.:.|........|.||....|.|.||....:|::.:.
  Fly  8659 PEPQISWSKNGKSLSSSDILDLRY-KNGIATLTINEVFPEDEGVITCTATNSVGAVETKCKLTIQ 8722

  Fly  3746 TLPDAPDSPEISANSGTEILLRWKQPR--DDGHSTVLCYSL---------------QYKLSNCDA 3793
            .|....:..:::|......::...:.|  .||.:..|...:               :.|.|....
  Fly  8723 PLDKNINKRKVNAGDNAPKIVSHLESRFVRDGDAVNLACRIIGAQHFDVVWLHNNKEIKPSKDFQ 8787

  Fly  3794 WTTVADNIDHEFYLLH--DLQPNTNYQFRLASKNRIGWSEMGIPVSASTVGGDAPKIHITKAMKH 3856
            :|..|:     .|.|.  ::.|.....:...:.|.||.|.....::.:..|.:..:....|....
  Fly  8788 YTNEAN-----IYRLQIAEIFPEDGGTYTCEAFNDIGESFSTCTINVTVPGDETKQPSFVKFPTS 8847

  Fly  3857 LQQLTENGHQVVPEEERVHTDYHCE--REPPN--WVTDSSVSD----KYSFISEIARGEFS 3909
            :..|...|           |.:.||  .|..|  |:.|....|    :|||..:..|..|:
  Fly  8848 VSVLEGEG-----------TTFECEIDSELLNLVWLKDGKPIDETLPRYSFTKDGHRYSFA 8897

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
ObscNP_001097440.1 RhoGEF 90..260 CDD:238091 26/173 (15%)
PH_unc89 275..388 CDD:270134 27/167 (16%)
Not5 <477..>652 CDD:444384 37/199 (19%)
Ig 1017..1108 CDD:472250 19/98 (19%)
Ig strand B 1034..1038 CDD:409353 0/3 (0%)
Ig strand C 1046..1050 CDD:409353 0/3 (0%)
Ig strand E 1074..1078 CDD:409353 1/3 (33%)
Ig strand F 1088..1093 CDD:409353 2/4 (50%)
Ig strand G 1101..1104 CDD:409353 0/2 (0%)
I-set 1123..1212 CDD:400151 25/94 (27%)
Ig strand B 1140..1144 CDD:409353 0/3 (0%)
Ig strand C 1153..1157 CDD:409353 1/3 (33%)
Ig strand E 1182..1186 CDD:409353 1/3 (33%)
Ig strand F 1196..1201 CDD:409353 1/4 (25%)
Ig strand G 1209..1212 CDD:409353 0/2 (0%)
Ig <1236..1299 CDD:472250 16/73 (22%)
Ig strand C 1238..1242 CDD:409353 0/4 (0%)
Ig strand E 1259..1269 CDD:409353 2/9 (22%)
Ig strand F 1279..1284 CDD:409353 2/12 (17%)
Ig strand G 1292..1295 CDD:409353 0/2 (0%)
I-set 1313..1403 CDD:400151 23/123 (19%)
Ig strand B 1330..1334 CDD:409353 1/3 (33%)
Ig strand C 1343..1347 CDD:409353 1/3 (33%)
Ig strand E 1369..1373 CDD:409353 0/3 (0%)
Ig strand F 1383..1388 CDD:409353 1/6 (17%)
Ig strand G 1396..1399 CDD:409353 1/2 (50%)
Ig_3 1406..1487 CDD:464046 20/82 (24%)
I-set 1499..1595 CDD:400151 30/106 (28%)
Ig strand B 1522..1526 CDD:409353 0/3 (0%)
Ig strand C 1535..1539 CDD:409353 2/3 (67%)
Ig strand E 1561..1565 CDD:409353 1/3 (33%)
Ig strand F 1575..1580 CDD:409353 2/4 (50%)
Ig strand G 1588..1591 CDD:409353 1/2 (50%)
Ig 1599..1690 CDD:472250 21/111 (19%)
Ig strand B 1617..1621 CDD:409353 2/3 (67%)
Ig strand C 1630..1634 CDD:409353 1/3 (33%)
Ig strand E 1656..1660 CDD:409353 0/3 (0%)
Ig strand F 1670..1675 CDD:409353 0/4 (0%)
Ig strand G 1683..1686 CDD:409353 1/2 (50%)
I-set 1694..1786 CDD:400151 27/92 (29%)
Ig strand B 1711..1715 CDD:409353 1/3 (33%)
Ig strand C 1724..1728 CDD:409353 0/3 (0%)
Ig strand E 1752..1756 CDD:409353 1/3 (33%)
Ig strand F 1766..1771 CDD:409353 1/4 (25%)
Ig strand G 1779..1782 CDD:409353 0/2 (0%)
Ig <1836..1903 CDD:472250 22/110 (20%)
Ig strand C 1846..1850 CDD:409353 1/3 (33%)
Ig strand E 1871..1875 CDD:409353 0/3 (0%)
Ig strand F 1885..1890 CDD:409353 1/4 (25%)
Ig 1922..2005 CDD:472250 25/136 (18%)
Ig strand B 1933..1937 CDD:409353 0/3 (0%)
Ig strand C 1946..1950 CDD:409353 1/3 (33%)
Ig strand E 1971..1984 CDD:409353 5/12 (42%)
Ig strand F 1994..1999 CDD:409353 3/4 (75%)
Ig 2018..2108 CDD:472250 27/299 (9%)
Ig strand B 2034..2038 CDD:409353 1/3 (33%)
Ig strand C 2047..2051 CDD:409353 0/3 (0%)
Ig strand E 2074..2078 CDD:409353 0/3 (0%)
Ig strand F 2088..2093 CDD:409353 2/4 (50%)
Ig strand G 2101..2104 CDD:409353 0/7 (0%)
Ig 2113..2214 CDD:472250 27/122 (22%)
Ig strand B 2130..2134 CDD:409353 1/3 (33%)
Ig strand C 2143..2147 CDD:409353 3/3 (100%)
Ig strand E 2176..2185 CDD:409353 1/8 (13%)
Ig strand F 2195..2200 CDD:409353 2/4 (50%)
I-set 2220..2302 CDD:400151 23/178 (13%)
Ig strand B 2238..2242 CDD:409353 0/3 (0%)
Ig strand C 2251..2255 CDD:409353 1/38 (3%)
Ig strand E 2277..2281 CDD:409353 0/3 (0%)
Ig strand F 2291..2296 CDD:409353 0/4 (0%)
Ig strand G 2304..2307 CDD:409353 0/2 (0%)
I-set 2318..2408 CDD:400151 22/151 (15%)
Ig strand B 2335..2339 CDD:409353 0/3 (0%)
Ig strand C 2348..2352 CDD:409353 0/3 (0%)
Ig strand E 2374..2378 CDD:409353 0/3 (0%)
Ig strand F 2388..2393 CDD:409353 1/4 (25%)
Ig 2415..2506 CDD:472250 27/189 (14%)
Ig strand B 2432..2436 CDD:409353 0/16 (0%)
Ig strand C 2445..2449 CDD:409353 0/3 (0%)
Ig strand E 2472..2476 CDD:409353 1/7 (14%)
Ig strand F 2486..2491 CDD:409353 3/6 (50%)
Ig strand G 2499..2502 CDD:409353 1/4 (25%)
I-set 2519..2608 CDD:400151 25/90 (28%)
Ig strand B 2536..2540 CDD:409353 0/3 (0%)
Ig strand C 2549..2553 CDD:409353 0/3 (0%)
Ig strand E 2574..2578 CDD:409353 0/3 (0%)
Ig strand F 2588..2593 CDD:409353 2/4 (50%)
I-set 2615..2696 CDD:400151 26/287 (9%)
Ig strand B 2632..2636 CDD:409353 2/29 (7%)
Ig strand C 2645..2649 CDD:409353 2/3 (67%)
Ig strand E 2670..2674 CDD:409353 0/3 (0%)
Ig strand F 2684..2689 CDD:409353 0/4 (0%)
Ig strand G 2697..2700 CDD:409353 0/2 (0%)
I-set 2717..2805 CDD:400151 28/133 (21%)
Ig strand B 2734..2738 CDD:409353 2/9 (22%)
Ig strand C 2747..2751 CDD:409353 0/3 (0%)
Ig strand E 2773..2777 CDD:409353 2/3 (67%)
Ig strand F 2787..2792 CDD:409353 2/4 (50%)
Ig strand G 2800..2803 CDD:409353 0/2 (0%)
FN3 2834..2925 CDD:238020 25/96 (26%)
Ig <2996..3063 CDD:472250 19/66 (29%)
Ig strand C 3003..3007 CDD:409353 0/3 (0%)
Ig strand E 3029..3033 CDD:409353 1/3 (33%)
Ig strand F 3043..3048 CDD:409353 1/4 (25%)
Ig strand G 3056..3059 CDD:409353 0/2 (0%)
Ig 3067..3157 CDD:472250 25/92 (27%)
Ig strand B 3085..3088 CDD:409353 1/2 (50%)
Ig strand C 3097..3101 CDD:409353 1/3 (33%)
Ig strand E 3123..3127 CDD:409353 2/3 (67%)
Ig strand F 3137..3142 CDD:409353 2/4 (50%)
Ig strand G 3150..3153 CDD:409353 0/2 (0%)
PK_Unc-89_rpt1 3182..3440 CDD:271011 91/259 (35%)
Ig 3654..3744 CDD:472250 23/89 (26%)
Ig strand B 3671..3675 CDD:409353 0/3 (0%)
Ig strand C 3684..3688 CDD:409353 0/3 (0%)
Ig strand E 3710..3714 CDD:409353 1/3 (33%)
Ig strand F 3724..3729 CDD:409353 1/4 (25%)
Ig strand G 3737..3740 CDD:409353 0/2 (0%)
FN3 3748..3840 CDD:238020 16/110 (15%)
STKc_Unc-89_rpt2 3893..4151 CDD:271014 6/21 (29%)
btNP_001162825.1 Ig 9..101 CDD:472250
Ig strand B 26..30 CDD:409353
Ig strand C 39..43 CDD:409353
Ig strand E 69..73 CDD:409353
Ig strand F 83..88 CDD:409353
Ig strand G 96..99 CDD:409353
I-set 119..210 CDD:400151
Ig strand B 136..140 CDD:409353
Ig strand C 149..153 CDD:409353
Ig strand E 174..182 CDD:409353
Ig strand F 192..197 CDD:409353
Ig strand G 205..208 CDD:409353
Ig 228..320 CDD:472250
Ig strand B 245..249 CDD:409353
Ig strand C 258..262 CDD:409353
Ig strand E 286..292 CDD:409353
Ig strand F 302..307 CDD:409353
Ig strand G 317..320 CDD:409353
Ig 335..425 CDD:472250
Ig strand B 350..354 CDD:409353
Ig strand C 363..367 CDD:409353
Ig strand E 393..397 CDD:409353
Ig strand F 407..412 CDD:409353
Ig strand G 420..423 CDD:409353
Ig 438..532 CDD:472250
Ig strand B 455..459 CDD:409353
Ig strand C 468..472 CDD:409353
Ig strand E 498..502 CDD:409353
Ig strand F 512..517 CDD:409353
Ig strand G 525..528 CDD:409353
Ig 545..636 CDD:472250
Ig strand B 560..564 CDD:409353
Ig strand C 573..577 CDD:409353
Ig strand E 599..606 CDD:409353
Ig strand F 616..621 CDD:409353
Ig strand G 629..632 CDD:409353
Ig 656..726 CDD:472250
Ig strand B 657..661 CDD:409353
Ig strand C 670..674 CDD:409353
Ig strand E 700..704 CDD:409353
Ig strand F 714..719 CDD:409353
Ig strand G 728..731 CDD:409353
Ig 746..835 CDD:472250
Ig strand C 777..781 CDD:409353
Ig strand E 802..806 CDD:409353
Ig strand F 816..821 CDD:409353
Ig 1508..1588 CDD:472250
Ig strand B 1514..1518 CDD:409353
Ig strand C 1527..1531 CDD:409353
Ig strand E 1554..1558 CDD:409353
Ig strand F 1568..1573 CDD:409353
Ig strand G 1581..1584 CDD:409353
Ig 1639..1724 CDD:472250
IG_like 1750..1821 CDD:214653
Ig strand B 1750..1753 CDD:409353
Ig strand C 1761..1765 CDD:409353
Ig strand E 1788..1792 CDD:409353
Ig strand F 1802..1806 CDD:409353
Ig 1826..1909 CDD:472250
Ig strand B 1842..1846 CDD:409353
Ig strand C 1854..1858 CDD:409353
Ig strand E 1879..1883 CDD:409353
Ig 1914..1998 CDD:472250
Ig 2020..2095 CDD:472250
Ig strand B 2021..2025 CDD:409353
Ig strand C 2038..2042 CDD:409353
Ig strand E 2062..2066 CDD:409353
Ig strand F 2076..2081 CDD:409353
Ig strand G 2089..2092 CDD:409353
FN3 2100..2194 CDD:238020
FN3 2203..2292 CDD:238020
Ig 2314..2395 CDD:472250
Ig strand B 2322..2326 CDD:409353
Ig strand C 2335..2339 CDD:409353
Ig strand E 2361..2365 CDD:409353
Ig strand F 2375..2380 CDD:409353
FN3 <2376..2753 CDD:442628
Ig strand G 2388..2391 CDD:409353
FN3 2501..2590 CDD:238020
FN3 <2673..>2891 CDD:442628
Ig 2902..2995 CDD:472250
Ig strand B 2920..2924 CDD:409353
Ig strand C 2933..2937 CDD:409353
FN3 <2957..>3191 CDD:442628
Ig strand E 2961..2965 CDD:409353
Ig strand F 2975..2980 CDD:409353
Ig strand G 2988..2991 CDD:409353
FN3 2999..3088 CDD:238020
Ig 3212..3292 CDD:472250
Ig strand B 3220..3224 CDD:409353
Ig strand C 3233..3237 CDD:409353
Ig strand E 3258..3262 CDD:409353
Ig strand F 3272..3277 CDD:409353
Ig strand G 3285..3288 CDD:409353
FN3 3296..3390 CDD:238020
FN3 3400..3489 CDD:238020
I-set 3494..3590 CDD:400151 9/30 (30%)
Ig strand B 3517..3521 CDD:409353
Ig strand C 3530..3534 CDD:409353