DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vmat and LOC101732756

DIOPT Version :9

Sequence 1:NP_001014525.1 Gene:Vmat / 3346192 FlyBaseID:FBgn0260964 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_031762366.1 Gene:LOC101732756 / 101732756 -ID:- Length:515 Species:Xenopus tropicalis


Alignment Length:496 Identity:277/496 - (55%)
Similarity:344/496 - (69%) Gaps:66/496 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 WMVSWRGSNRLVLVIVAIALLLDNMLLTTVVPIIPEFLY----------DIRHPD-APLDSF--- 180
            |:...|.|.:|:|:||.|||||||||||.||||||.:||          |..||. ||..|.   
 Frog    11 WLREGRQSRKLILLIVFIALLLDNMLLTVVVPIIPSYLYTMTHEGNSSQDEAHPSTAPGGSHSIF 75

  Fly   181 -------------------PR---TPLTSNVPPPPT--PCPCNKDGSEAAPLEISTISPEENETY 221
                               ||   ||.:|..|.|||  |..|.:..|                  
 Frog    76 SYYDNTTVTITNSTRSTHQPRSAVTPTSSPSPSPPTAPPADCPRADS------------------ 122

  Fly   222 YRELEERHNELVGETVEVGLLFASKAFVQLLVNPIVGPLTHRIGYSIPMFAGFVIMFLSTIIFAF 286
                     .|:.|.|:|||||||||.||||.||.:||:|:||||.|||||||.|||:|||:|||
 Frog   123 ---------SLLNENVKVGLLFASKATVQLLTNPFIGPMTNRIGYQIPMFAGFCIMFVSTIMFAF 178

  Fly   287 GRSYLVLFVARALQGIGSSCSSVSGMGMLADRFTDDKERGNAMGIALGGLALGVLIGPPFGGVMY 351
            ..||.:||:||:|||||||||||:||||||..:|||:||||||||||||||:|||:|||||.::|
 Frog   179 SGSYALLFIARSLQGIGSSCSSVAGMGMLASVYTDDEERGNAMGIALGGLAMGVLVGPPFGSILY 243

  Fly   352 EFVGKSAPFLILAALALGDGLLQLFMLQPSIQKAETEPPS-LKSLISDPYILIAAGAITFANMGI 415
            |||||:||||:||.|.|.||.||||:||||..:.|::..: |.:||.|||||||||:|.||||.|
 Frog   244 EFVGKTAPFLVLAVLVLFDGALQLFVLQPSRVQPESQTGTPLLTLIRDPYILIAAGSICFANMAI 308

  Fly   416 AMLEPSLPLWMVDNMGATRWEQGVAFLPASISYLIGTNLFGPLGHKIGRWFAACLGLIIIGGCLI 480
            |||||:||:||::.|.:.:|:.||||||||||||||||:||||.||:|||..|.:|:|::|..:|
 Frog   309 AMLEPALPIWMMETMCSRKWQLGVAFLPASISYLIGTNVFGPLAHKMGRWLCAFIGMIVVGISII 373

  Fly   481 FIPMATSITHLIIPNAGLGFAIGMVDSSMMPELGYLVDIRHSAVYGSVYALGDVAFCVGFAVGPA 545
            .:|.|.:|..||.|..|:|||||||||||||.:|||||:||.:|||||||:.|||||:|||.||:
 Frog   374 CVPFARNIYGLIAPTFGVGFAIGMVDSSMMPIMGYLVDLRHVSVYGSVYAIADVAFCMGFAFGPS 438

  Fly   546 LSGSLVKSIGFEWMLFGIAILCFMYAPLLTLLKNPPTSDEK 586
            ..|::.|||||.|::..|.::..::|||...|::||..:||
 Frog   439 AGGAIAKSIGFPWLMTIIGVVDVLFAPLCLFLRSPPAREEK 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VmatNP_001014525.1 MFS 238..578 CDD:119392 225/340 (66%)
MFS_1 238..544 CDD:284993 212/306 (69%)
LOC101732756XP_031762366.1 MFS_SLC18A1_2_VAT1_2 22..471 CDD:340942 268/475 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 386 1.000 Domainoid score I803
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 523 1.000 Inparanoid score I1229
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D406900at33208
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 1 1.000 - - otm47468
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2059
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.060

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