DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vmat and LOC101731380

DIOPT Version :9

Sequence 1:NP_001014525.1 Gene:Vmat / 3346192 FlyBaseID:FBgn0260964 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_031755164.1 Gene:LOC101731380 / 101731380 -ID:- Length:414 Species:Xenopus tropicalis


Alignment Length:422 Identity:212/422 - (50%)
Similarity:279/422 - (66%) Gaps:26/422 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 NVPPPPTPCPCNKDGSEAAPLEI---STISPEE----NETYYRELEE--RHNE--LVGETVEVGL 241
            |...||.|      ||..:...:   |:.||.|    |.||....|.  ::|.  |..|.:.|||
 Frog     3 NTSTPPAP------GSSFSSFLLNNESSGSPNELEDTNRTYVPNKETICKNNTSVLQEENITVGL 61

  Fly   242 LFASKAFVQLLVNPIVGPLTHRIGYSIPMFAGFVIMFLSTIIFAFGRSYLVLFVARALQGIGSSC 306
            |.||||.||:|.||||..:|:|:||.:||..||:|...|.::|||..||.:|||||:|||||:|.
 Frog    62 LLASKAIVQILFNPIVSLITYRLGYELPMIFGFIITLPSILLFAFASSYSLLFVARSLQGIGTSF 126

  Fly   307 SSVSGMGMLADRFTDDKERGNAMGIALGGLALGVLIGPPFGGVMYEFVGKSAPFLILAALALGDG 371
            :|||||.:||:::|||||||.||||||||:|||::.|||||..||.||||::||||||||.|.||
 Frog   127 TSVSGMAILANKYTDDKERGEAMGIALGGVALGLVAGPPFGSAMYAFVGKASPFLILAALTLLDG 191

  Fly   372 LLQLFMLQPSIQKAETEP-----PSLKSLISDPYILIAAGAITFANMGIAMLEPSLPLWMVDNMG 431
            .|:|.:|.||    :|.|     |:..:|:.||||::|||:|...||.|||.||:||:||:..|.
 Frog   192 ALRLLILTPS----KTAPLTIAAPAFCALLKDPYIVLAAGSICLTNMVIAMAEPTLPVWMLGTMC 252

  Fly   432 ATRWEQGVAFLPASISYLIGTNLFGPLGHKIGRWFAACLGLIIIGGCLIFIPMATSITHLIIPNA 496
            ...|..|:.|.|||||||:.|||...|..|||||..:.||:::.|...:.:|:|.:...||.|.|
 Frog   253 TPDWLLGIVFFPASISYLVCTNLLPRLSQKIGRWLCSLLGMVLAGISFLCVPLAVNFYGLITPIA 317

  Fly   497 GLGFAIGMVDSSMMPELGYLVDIRHSAVYGSVYALGDVAFCVGFAVGPALSGSLVKSIGFEWMLF 561
            ..|.:|||||.||:|.:.||||:|||:|||.|||:.|:|..:||||||.::|...|:||..|::.
 Frog   318 AFGISIGMVDVSMVPLMAYLVDLRHSSVYGGVYAISDIALNLGFAVGPCVAGITAKAIGLPWLMV 382

  Fly   562 GIAILCFMYAPLLTLLKNPPTSDEKKVRMARE 593
            .||:|..||:||..||:|||...||...:.:|
 Frog   383 IIAVLNIMYSPLCILLRNPPGKSEKMAILNKE 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VmatNP_001014525.1 MFS 238..578 CDD:119392 188/344 (55%)
MFS_1 238..544 CDD:284993 173/310 (56%)
LOC101731380XP_031755164.1 MFS_SLC18A1_2_VAT1_2 54..399 CDD:340942 189/348 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG59108
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000700
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23506
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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