DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9879 and TBP2

DIOPT Version :8

Sequence 1:NP_608699.1 Gene:CG9879 / 33452 FlyBaseID:FBgn0031444 Length:331 Species:Drosophila melanogaster
Sequence 2:NP_001321103.1 Gene:TBP2 / 841999 AraportID:AT1G55520 Length:200 Species:Arabidopsis thaliana

Alignment Length:170 Identity:37/171 (22%)
Similarity:75/171 (44%) Gaps:11/171 (6%)


  Fly   130 MDFNCRFSMYELCLLLAESRFDPSSHPSVVVKITHPSAQVKIHAGGKISSTALNAD-----SARS 189
            ::.:|:..:..:.|....:.::|....:|:::|..|.....|.|.||:..|...::     :|| 
plant    32 VNLDCKLDLKAIALQARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEHLSKLAAR- 95

  Fly   190 GLFKVIRILQDLDYKVDIMNFS-KNIVNASFSMPFKIDLDLMSRRHVVEVAQNRSRRPFITYTTE 253
               |..||:|.|.:.....:|. :||| .|..:.|.|.|:.::..|....:......|.:.|..:
plant    96 ---KYARIVQKLGFPAKFKDFKIQNIV-GSCDVKFPIRLEGLAYSHSAFSSYEPELFPGLIYRMK 156

  Fly   254 NLGVRFAVFPTGFVLVLHSTSHCETREAIANFLPILAKLK 293
            ...:...:|.:|.:::..:....||..|..|..|:|.:.:
plant   157 LPKIVLLIFVSGKIVITGAKMREETYTAFENIYPVLREFR 196

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG9879NP_608699.1 TBP 128..200 CDD:278767 17/75 (23%)
PLN00062 131..294 CDD:177693 37/170 (22%)
TBP 213..291 CDD:278767 18/78 (23%)
TBP2NP_001321103.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 O PTHR10126
Phylome 00.000 Not matched by this tool.
11.100

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