DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4271 and F11

DIOPT Version :9

Sequence 1:NP_608665.1 Gene:CG4271 / 33410 FlyBaseID:FBgn0031409 Length:242 Species:Drosophila melanogaster
Sequence 2:XP_005262878.1 Gene:F11 / 2160 HGNCID:3529 Length:626 Species:Homo sapiens


Alignment Length:218 Identity:66/218 - (30%)
Similarity:105/218 - (48%) Gaps:31/218 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 HECGGAVIDSRIVLTAAQC---VKNKPVKRITVRV-GTPDIYRGGRIIRVTALVVHENYKNWDN- 101
            |.|||::|.::.:||||.|   |::..:.|:...: ...:|........|..:::|:.||..:: 
Human   415 HLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESG 479

  Fly   102 -DIALLWLEKPVLSVRVTKIPLATKEPSENE----YPS--NAGWGEKLLESYVVTRKLQNGVTKI 159
             |||||.||..| :...::.|:..  ||:.:    |..  ..|||.:.|..     |:||.:.|.
Human   480 YDIALLKLETTV-NYTDSQRPICL--PSKGDRNVIYTDCWVTGWGYRKLRD-----KIQNTLQKA 536

  Fly   160 RPRSMCAEELVE-----PVGEELLCAFYTE--NDICPGDYGGPLVLANK----VVGIAVQGHGCG 213
            :...:..||..:     .:..:::||.|.|  .|.|.||.||||...:.    :|||...|.||.
Human   537 KIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACKGDSGGPLSCKHNEVWHLVGITSWGEGCA 601

  Fly   214 FAVLPSLYTNVFHYLEWIEENAE 236
            ....|.:||||..|::||.|..:
Human   602 QRERPGVYTNVVEYVDWILEKTQ 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4271NP_608665.1 Tryp_SPc 19..234 CDD:238113 65/214 (30%)
Tryp_SPc 19..231 CDD:214473 63/211 (30%)
F11XP_005262878.1 APPLE 20..103 CDD:128519
APPLE 110..193 CDD:128519
APPLE 200..283 CDD:128519
APPLE 291..375 CDD:128519
Tryp_SPc 388..619 CDD:214473 63/211 (30%)
Tryp_SPc 389..619 CDD:238113 63/211 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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