DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4271 and LOC1278484

DIOPT Version :10

Sequence 1:NP_608665.1 Gene:CG4271 / 33410 FlyBaseID:FBgn0031409 Length:242 Species:Drosophila melanogaster
Sequence 2:XP_318080.5 Gene:LOC1278484 / 1278484 VectorBaseID:AGAMI1_009068 Length:315 Species:Anopheles gambiae


Alignment Length:219 Identity:57/219 - (26%)
Similarity:90/219 - (41%) Gaps:47/219 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CGGAVIDSRIVLTAAQCVKNKPVKRITVRVGTPDIYRGGRIIRVTALV--VHENYKNW--DNDIA 104
            |||::|:::.|||||.|..:..|    .::|...|:.....:.::.::  ||..:..|  .||:|
Mosquito    99 CGGSLIEAQWVLTAAHCANDYTV----FQIGLGSIHLNMARLTMSTVIKFVHPEFDPWKLTNDVA 159

  Fly   105 LLWLEKPV-LSVRVTKIPLATKEPSENEYPSN----AGWGE--------KLLESYVVTRKLQN-- 154
            |:.|..|| .|:.:..|.|....|..:.|...    :|:|.        ..:..|...|.:.|  
Mosquito   160 LIRLPSPVPYSLEIYPIKLPINLPPTDLYIGRQVTVSGFGRTSDAIQSISTILKYERMRIISNAE 224

  Fly   155 -----GVTKIRPRSMCAEELVEPVGEELLCAFYTENDICPGDYGGPLVLANK-----VVGIA--V 207
                 |...||..::||.....|.           .::|.||.|||:|:...     .:||.  |
Mosquito   225 CTNVYGAAIIRNTTLCAVGWERPY-----------QNVCQGDSGGPMVMQQDDSSWVQIGIVSFV 278

  Fly   208 QGHGCGFAVLPSLYTNVFHYLEWI 231
            ...||.... ||.|....:||.|:
Mosquito   279 SSRGCSTGD-PSGYIRTVNYLSWL 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4271NP_608665.1 Tryp_SPc 19..234 CDD:238113 57/219 (26%)
LOC1278484XP_318080.5 None

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