DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4271 and CLIPD8

DIOPT Version :9

Sequence 1:NP_608665.1 Gene:CG4271 / 33410 FlyBaseID:FBgn0031409 Length:242 Species:Drosophila melanogaster
Sequence 2:XP_312135.5 Gene:CLIPD8 / 1273182 VectorBaseID:AGAP002784 Length:588 Species:Anopheles gambiae


Alignment Length:265 Identity:83/265 - (31%)
Similarity:113/265 - (42%) Gaps:41/265 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IGS--CWVLILFARSSNGIYNGVEAKFDFWTFLASV------WVSGYHECGGAVIDSRIVLTAAQ 59
            |||  |.:..: .|....|..|..|.|..|.:..||      ..|..|.||||||:...:.||..
Mosquito   328 IGSSKCGIQTM-GRPETRIVGGKNAPFGRWPWQVSVRRTSFFGFSSTHRCGGAVINDNWIATAGH 391

  Fly    60 CVKNKPVKRITVRVG----------TPDIYRGGRIIRVTALVVHENYK--NWDNDIALLWLEKP- 111
            ||.:....:|.:|||          .|.|.||     |...|||..|.  .::.|:||:.||:| 
Mosquito   392 CVDDLLTSQIRIRVGEYDFSHVQEQLPYIERG-----VARKVVHPKYNFFTYEFDLALVKLEQPL 451

  Fly   112 VLSVRVTKIPL-ATKEPSENEYPSNAGWGEKLLESYVVTRKLQNGVTKIRPRSMCAEELV----- 170
            |.:..::.|.| ||.:....|..:..||| :|.|...:...||.....|.....|....:     
Mosquito   452 VFAPHISPICLPATDDLLIGENATVTGWG-RLSEGGTLPSVLQEVSVPIVSNDRCKSMFLRAGRH 515

  Fly   171 EPVGEELLCAFYTE--NDICPGDYGGPLVLANK-----VVGIAVQGHGCGFAVLPSLYTNVFHYL 228
            |.:.:..|||.:..  .|.|.||.||||.:..|     :.||...|.||..|.||.:.|.:..::
Mosquito   516 EFIPDIFLCAGHETGGQDSCQGDSGGPLQVKGKDGHYFLAGIISWGIGCAEANLPGVCTRISKFV 580

  Fly   229 EWIEE 233
            .||.|
Mosquito   581 PWIME 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4271NP_608665.1 Tryp_SPc 19..234 CDD:238113 78/247 (32%)
Tryp_SPc 19..231 CDD:214473 75/243 (31%)
CLIPD8XP_312135.5 Tryp_SPc 344..583 CDD:214473 75/244 (31%)
Tryp_SPc 345..586 CDD:238113 78/247 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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