DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and TUP1

DIOPT Version :10

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:NP_010007.1 Gene:TUP1 / 850445 SGDID:S000000680 Length:713 Species:Saccharomyces cerevisiae


Alignment Length:515 Identity:94/515 - (18%)
Similarity:178/515 - (34%) Gaps:155/515 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 SATLEYVTTLPRT-----------------HYLGVDVAQGIQINHIMSVP------QQAKFPDCI 369
            |||....||...|                 |||   |....:.||...:|      .....||.:
Yeast   253 SATTATTTTATETEIKPKEEDATPASLHQDHYL---VPYNQRANHSKPIPPFLLDLDSQSVPDAL 314

  Fly   370 AMVFDEQRSKVSCVYNDHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPYNVEREPSQTLPEE 434
                .:|.:....:||                               ..:|..::.|..::|...
Yeast   315 ----KKQTNDYYILYN-------------------------------PALPREIDVELHKSLDHT 344

  Fly   435 CFVTC---SSDDTIRVWGLDGCTNNDIYRRNIYSKELLKIVYSDDELQFIKDQGSSLFDKAGNSS 496
            ..|.|   |:|......|.:..|  .:||   .|...|....|||..  ..:..:|:.:....:|
Yeast   345 SVVCCVKFSNDGEYLATGCNKTT--QVYR---VSDGSLVARLSDDSA--ANNHRNSITENNTTTS 402

  Fly   497 YDGRN-------------------------------------GVRCIKISPELQHLASGDRCGNI 524
            .|...                                     .:|.:..||:.:.||:|.....|
Yeast   403 TDNNTMTTTTTTTITTTAMTSAAELAKDVENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLI 467

  Fly   525 RVYSLVNLRLLTTIEAHESEVLCLEY--SNEKIERKLLASASRDRLIHVFDVAQNYL-LLQTLDD 586
            |::.:.|.:::..::.||.::..|:|  |.:|     |.|.|.||.:.::|:..... |..:::|
Yeast   468 RIWDIENRKIVMILQGHEQDIYSLDYFPSGDK-----LVSGSGDRTVRIWDLRTGQCSLTLSIED 527

  Fly   587 HSSSITSI-------KFVGAGLNFQMISCGADKSI-MFRSFQGNIFMR--GTNTSG---KTTLYD 638
               .:|::       |::.||        ..|::: ::.|..|.:..|  ..|.||   |.::|.
Yeast   528 ---GVTTVAVSPGDGKYIAAG--------SLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYS 581

  Fly   639 MEVDSNAKHILTACQDRNVRVYGTQNAKQTKTFKGSHS---------DEGSLIKLSLDPSGIYVA 694
            :....:.:.:::...||:|:::..|||......|..:|         .:..::.::...:..|:.
Yeast   582 VVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYIL 646

  Fly   695 TSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFTN------DCRHLISASGDGCIFIWQ 748
            :...|:.:..:|..|...:..:.||...|..:...|      :.....:.|||....||:
Yeast   647 SGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSPLGPEYNVFATGSGDCKARIWK 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 <73..236 CDD:441893
WD40 repeat 73..107 CDD:293791
WD40 repeat 113..161 CDD:293791
WD40 156..573 CDD:475233 57/309 (18%)
WD40 repeat 167..207 CDD:293791
WD40 repeat 209..285 CDD:293791
WD40 repeat 303..338 CDD:293791 5/9 (56%)
WD40 repeat 353..407 CDD:293791 8/59 (14%)
WD40 <437..750 CDD:441893 73/383 (19%)
WD40 repeat 505..540 CDD:293791 8/34 (24%)
WD40 repeat 546..586 CDD:293791 11/42 (26%)
WD40 repeat 591..631 CDD:293791 9/49 (18%)
WD40 repeat 637..672 CDD:293791 7/34 (21%)
WD40 repeat 679..717 CDD:293791 4/37 (11%)
WD40 repeat 723..749 CDD:293791 7/32 (22%)
TUP1NP_010007.1 Tup_N 11..88 CDD:400755
WD40 343..706 CDD:238121 72/385 (19%)
WD40 repeat 347..383 CDD:293791 10/40 (25%)
WD40 repeat 394..438 CDD:293791 2/43 (5%)
WD40 repeat 447..483 CDD:293791 9/35 (26%)
WD40 repeat 488..523 CDD:293791 11/39 (28%)
WD40 repeat 530..566 CDD:293791 8/43 (19%)
WD40 repeat 579..627 CDD:293791 9/47 (19%)
WD40 repeat 633..669 CDD:293791 4/35 (11%)
WD40 repeat 675..705 CDD:293791 5/29 (17%)
Blue background indicates that the domain is not in the aligned region.

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