DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and wdr62

DIOPT Version :10

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:NP_001429277.1 Gene:wdr62 / 570949 ZFINID:ZDB-GENE-060503-291 Length:1520 Species:Danio rerio


Alignment Length:1449 Identity:489/1449 - (33%)
Similarity:720/1449 - (49%) Gaps:294/1449 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SQSQSPLASPLTPSPSSVFGSPKFPANYERS----------EKIKLKKVLGLTVCSNAALDVSPV 79
            |.:||.|.|....:.::   |...|||..|.          .::.|:||||:|..|::||...|.
Zfish    11 SMNQSCLTSRAKKANNN---STSVPANTRRKTRQSHRRDIHNRVVLEKVLGITASSSSALTCDPN 72

  Fly    80 SGLLAYPAGCTVVLFNAKRQTQAYLVNTSRKAFTSVAFSRCGRYVATGECGINPAIKVWELETPN 144
            :||:||||||.:|:.:.|:..|.::.|||||.|:::|||:.|:|:.|||.|..|.::||::    
Zfish    73 TGLVAYPAGCVIVILSPKKNKQTHIFNTSRKTFSALAFSQNGKYLVTGESGHMPCVRVWDV---- 133

  Fly   145 GSLEHCSGGSVVAEFVDHKYAVTCVAFSPTGKYLVSVGSQHDMIVNVFDWRANLKMASNKISSKV 209
                  :..:.|||...|||.|:||||||.|.|:||||.|||..|:|::|:....:||||:||:|
Zfish   134 ------AERTQVAEVQCHKYGVSCVAFSPNGSYIVSVGYQHDRTVSVWEWKKGTVIASNKVSSRV 192

  Fly   210 AAVCFSEDGSYFVTVGNRHVKYWYLEGG--RKYKDPIPLMGRSAILGDLRDNDFCAVACGKGICA 272
            ..|.||||.|||||.||||||:|||:..  |:....:||:|||.:||:.:::.||.:|||:|..|
Zfish   193 LGVSFSEDNSYFVTAGNRHVKFWYLDASKERRVNSTVPLIGRSGLLGEHQNSQFCGLACGRGSMA 257

  Fly   273 ESTYAITRQGHLVEFSSRRLLDKWVQCRTTNANCICVNERFILVGCAESIIRIFNSATLEYVTTL 337
            .|||.||..|.|.:|:|.|.||.||..:||:|.|:.|:..|:..|||:..:|:|:...|.|:|||
Zfish   258 SSTYCITHTGLLCQFNSNRQLDSWVDLKTTSAQCLSVSGTFVFCGCADGTVRVFSPQDLRYITTL 322

  Fly   338 PRTHYLGVDVAQGIQINHIMSVPQQAKFPDCIAMVFDEQRSKVSCVYNDHSLYIWDLRDISRVGK 402
            .|.|.|||||:||.|..|:.|...:|::||.:|:.||.....::|||||||:|:||:|||..|||
Zfish   323 HRPHCLGVDVSQGTQPGHLFSANPEAQYPDTLALTFDPVTKHLTCVYNDHSVYVWDVRDIRNVGK 387

  Fly   403 SHSFLYHSTCIWGVETVPYNVEREPSQTLPEECFVTCSSDDTIRVWGLDGCTNNDI---YRRNIY 464
            .:|.||||.|:|.|||.| .:|...:..|....|:|||||:|||:|..:...::..   .|.|:|
Zfish   388 VYSALYHSGCVWSVETYP-ELEDPSAACLSPGSFLTCSSDNTIRLWRSESPQSHSAGLGLRHNLY 451

  Fly   465 SKELLKIVYSDDELQFIKDQGSSLFDKA-GNSSYDGRNGVRCIKISPELQHLASGDRCGNIRVYS 528
            |:::::|||.||:.|::|.:..    || |.:..||::|:|.:.|||:.||||:|||.||:|::.
Zfish   452 SQDIVRIVYVDDDTQYLKAEAV----KAEGGAGQDGKSGIRVLGISPDGQHLAAGDRSGNLRIFG 512

  Fly   529 LVNLRLLTTIEAHESEVLCLEYSNEKIERKLLASASRDRLIHVFDVAQNYLLLQTLDDHSSSITS 593
            |..:..|..||||:||||||.:|..:....||||||||||||:||:.....|:||:.|||:|||:
Zfish   513 LQFMDELQKIEAHDSEVLCLAFSPAETGLHLLASASRDRLIHIFDMDSKCNLVQTVYDHSASITA 577

  Fly   594 IKFVGAGLNFQMISCGADKSIMFRSFQ----GNIFMRGTNTSGKTTLYDMEVDSNAKHILTACQD 654
            :||.|......|:|||||||:.|||.:    |.:|.|..:...|||||||::|:...|...||||
Zfish   578 VKFTGLNSELCMVSCGADKSVYFRSAEKTSDGLVFSRSHHIVEKTTLYDMDLDATRTHTAIACQD 642

  Fly   655 RNVRVYGTQNAKQTKTFKGSHSDEGSLIKLSLDPSGIYVATSCTDKTLAVYDYYSNECMARMYGH 719
            ||:|||..::.|..|.||||.:|:|:|:|:.|||||:::||||:||.:.|:||.|.||:|.::||
Zfish   643 RNIRVYNVKSGKMKKCFKGSMNDDGTLLKVQLDPSGMFLATSCSDKNICVFDYESGECVATLFGH 707

  Fly   720 SELVTGLKFTNDCRHLISASGDGCIFIWQVPHDMIVTMQARMSQQRLRSG----HAPLPRP---- 776
            ||:|||:||:.||||||:.|||.|:|:|::...|..:|:.|:::::.::|    .||..:.    
Zfish   708 SEIVTGMKFSQDCRHLITVSGDSCVFVWRLDSQMTNSMRKRLAERKQQAGLRLQRAPTKQEVIRR 772

  Fly   777 -------------------LAPISPPDGIV-------LESPTSEIEQPQLQPKFGVAERFSDVGQ 815
                               :|.::|.||:.       |:|..:.::...||..          |:
Zfish   773 ETYITVPCNALTHMEEDGLMAEVNPEDGLEDCRTPDRLDSTDASLDSVVLQTN----------GK 827

  Fly   816 LPQWAMRKAAADSDSGALSIPTPSGGSATVPGMHAASSMGNLSSSPSQQMTGLAPRA----RGRW 876
            :|.|..|                .||.....|                  ||.|.|.    :|||
Zfish   828 MPMWVRR----------------LGGEGEKDG------------------TGAANRVQYQPQGRW 858

  Fly   877 AQRSTQL--ETADDLRSNSESPLG-TVSSVGGHSGVNVQTSDYNSASSKDITYNQTYLSE--DSS 936
            |.:|..|  .|..:::|| :.||. |.|.|.|...:           .:|..::...|..  |..
Zfish   859 AVQSDPLAIRTVLEMKSN-QLPLSHTPSRVMGEEEL-----------EEDPRFHPQSLDSLLDED 911

  Fly   937 IDSGMETRRGELKFIGSSNNG----------------------TVVTVSSVSSIAVSASNGAMST 979
            ::.|.|....| |..|||.:|                      .:.:......|...|::.|:||
Zfish   912 LEDGEEEEEEE-KICGSSRDGFSSSLHGPEFLQFPHGEENFNPELSSSEKTGYILYPANSTALST 975

  Fly   980 GSGAAQQRLQL------PD-KRLKPGLRF-----DTHT-HDHDGDVEDISD-------------- 1017
            |.|....:...      || :.|.|....     ::|: ..||.|.:.:|.              
Zfish   976 GEGEFDVKALCEGTAGDPDEEELSPDSACSAESPESHSDQPHDQDTDSLSQVSSTGSSGVEEDEE 1040

  Fly  1018 -------------GERTSSDHGMFYNNLAPSTPTD-------------------FKVTAMNEDEL 1050
                         |..|:.......::|.|:|.::                   |:..|......
Zfish  1041 ESGTLLRQHFDTLGVATNEKFNTDLSSLQPTTESNFLNPRLSISTRFLSRFQSRFRSAACRPAAC 1105

  Fly  1051 RKSVRRQKFEKSGLQLT---PSALSGNGS---SHTASTGTGTSDTEDEGSTPSAENAERSLASTL 1109
            ..|:..:..:...|..|   |..||.:||   .........:|.:....|.||....:.:|    
Zfish  1106 LSSIPDESTDSQTLDQTMEKPKHLSNSGSVEEKEKTVIKRRSSMSSRRSSNPSLLRWKNAL---- 1166

  Fly  1110 GGSSENLPQSSTNSFLHAALPEGPGLTTPMERGGSSRRSISAKHNTENGKSVAAPPTITKSYTST 1174
             |...|..||:|.|...|     ||:.:......|...|::....:..|.:.::...|.:   |.
Zfish  1167 -GEITNKNQSTTQSTTSA-----PGVLSNKSTSNSCDASVTRSRQSYMGPTASSRAKINQ---SN 1222

  Fly  1175 KKEELLQVINKVKQQLENGTRKNGNTRLNAIAEVGH--------------------RPLRGSHSI 1219
            ..|.|...|::             .|.|||:..|.|                    .|:.|:|| 
Zfish  1223 SVESLNLCISE-------------ETPLNALPNVEHSKENMIPPSSPVVSSAPLHQSPVLGNHS- 1273

  Fly  1220 SDLSLAANLDGSRNAGGGP----GRYQKPVDSHDTSQYTSPQNTTATAAPTNTQQQIQPPVQQQY 1280
            :..||..:|.|...|...|    .|..| |:.||     ||:. .|...||           :..
Zfish  1274 ARASLRLDLIGHNRASLSPVSLKSRRGK-VEHHD-----SPRR-QALVTPT-----------EMR 1320

  Fly  1281 QIPKEPHQQAQQQHQQYAP 1299
            .:.||..:|.....|..||
Zfish  1321 SLGKESRKQISNIEQSLAP 1339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 <73..236 CDD:441893 83/162 (51%)
WD40 repeat 73..107 CDD:293791 14/33 (42%)
WD40 repeat 113..161 CDD:293791 15/47 (32%)
WD40 156..573 CDD:475233 209/422 (50%)
WD40 repeat 167..207 CDD:293791 22/39 (56%)
WD40 repeat 209..285 CDD:293791 41/77 (53%)
WD40 repeat 303..338 CDD:293791 13/34 (38%)
WD40 repeat 353..407 CDD:293791 25/53 (47%)
WD40 <437..750 CDD:441893 160/320 (50%)
WD40 repeat 505..540 CDD:293791 16/34 (47%)
WD40 repeat 546..586 CDD:293791 21/39 (54%)
WD40 repeat 591..631 CDD:293791 19/43 (44%)
WD40 repeat 637..672 CDD:293791 16/34 (47%)
WD40 repeat 679..717 CDD:293791 21/37 (57%)
WD40 repeat 723..749 CDD:293791 17/25 (68%)
wdr62NP_001429277.1 None

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