DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and Wdr62

DIOPT Version :10

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:XP_011248842.1 Gene:Wdr62 / 233064 MGIID:1923696 Length:1550 Species:Mus musculus


Alignment Length:1489 Identity:495/1489 - (33%)
Similarity:733/1489 - (49%) Gaps:345/1489 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ASLSASTPTLSTLHHQRMALQSQSQSPLASP--------LTPSPSSVFGSPKFPANYERSEKIKL 60
            :|:.|..|          |.::||..|.|.|        |..:|....           ..::.|
Mouse    20 SSVMAGVP----------ARRNQSSPPPAPPLCLRRRTRLAAAPEDTV-----------QNRVTL 63

  Fly    61 KKVLGLTVCSNAALDVSPVSGLLAYPAGCTVVLFNAKRQTQAYLVNTSRKAFTSVAFSRCGRYVA 125
            :||||:|..:::.|...|.:|.:||.|||.||:.|.|...|.::.||:||:.:::|||..|:|:.
Mouse    64 EKVLGITAQNSSGLTCDPGTGHVAYLAGCVVVVLNPKENKQQHIFNTTRKSLSALAFSPDGKYIV 128

  Fly   126 TGECGINPAIKVWELETPNGSLEHCSGGSVVAEFVDHKYAVTCVAFSPTGKYLVSVGSQHDMIVN 190
            |||.|..||:::|::|..          :.|||.:.|||.|.||||||..|::||:|.||||::|
Mouse   129 TGENGHRPAVRIWDVEEK----------TQVAEMLGHKYGVACVAFSPNMKHIVSMGYQHDMVLN 183

  Fly   191 VFDWRANLKMASNKISSKVAAVCFSEDGSYFVTVGNRHVKYWYLEGGRKYK--DPIPLMGRSAIL 253
            |:||:.::.:||||:|.:|.|:.||||.|||||||||||::|:||...:.|  ..:||:|||.||
Mouse   184 VWDWKKDIVVASNKVSCRVIALSFSEDSSYFVTVGNRHVRFWFLEASTEAKVTSTVPLVGRSGIL 248

  Fly   254 GDLRDNDFCAVACGKGICAESTYAITRQGHLVEFSSRRLLDKWVQCRTTNANCICVNERFILVGC 318
            |:|.:|.||.||||:|..|.:|:.::..|.|.:|:.:|:||||:..:.:.::|:||::..|..||
Mouse   249 GELHNNIFCGVACGRGRMAGNTFCVSYSGLLCQFNEKRVLDKWINLKVSLSSCLCVSDELIFCGC 313

  Fly   319 AESIIRIFNSATLEYVTTLPRTHYLGVDVAQGIQINHIMSVPQQAKFPDCIAMVFDEQRSKVSCV 383
            .:.|:|||.:.:|.|:|.||:.||||||||.|:..:.:.....:|.:||.:|:.||.....:|||
Mouse   314 TDGIVRIFQAHSLLYLTNLPKPHYLGVDVAHGLDSSFLFHRKAEAVYPDTVALTFDPVHQWLSCV 378

  Fly   384 YNDHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPYNVEREPSQT-LPEECFVTCSSDDTIRV 447
            |.|||:||||::||..|.|..|.|:||:.:|.||..|   |.|..:. ||...|:|||||:|||.
Mouse   379 YKDHSIYIWDVKDIDEVSKIWSELFHSSFVWNVEVYP---EFEDQRACLPSGTFLTCSSDNTIRF 440

  Fly   448 WGLDGCTNNDIYRRNIYSKELLKIVYSDDELQFIKDQGSSLFDKAGNSS---YDGRNGVRCIKIS 509
            |.||..::.. :::||:|..|||:||.::::|.::|  .|.|...|:.:   .|.:.|||.:::|
Mouse   441 WNLDSASDTR-WQKNIFSDSLLKVVYVENDIQHLQD--LSHFPDRGSENGTPMDMKAGVRVMQVS 502

  Fly   510 PELQHLASGDRCGNIRVYSLVNLRLLTTIEAHESEVLCLEYSNEKIERKLLASASRDRLIHVFDV 574
            |:.||||||||.||:|::.|..:..|..:|||::||||||||..:....|||||||||||||.:|
Mouse   503 PDGQHLASGDRSGNLRIHELHFMDELIKVEAHDAEVLCLEYSKPETGVTLLASASRDRLIHVLNV 567

  Fly   575 AQNYLLLQTLDDHSSSITSIKFVGAGLNFQMISCGADKSIMFRSFQ----GNIFMRGTNTSGKTT 635
            .:||.|.|||||||||||:|||.|. .:.|||||||||||.|||.|    |..|:|..:.:.|||
Mouse   568 EKNYNLEQTLDDHSSSITAIKFAGT-RDVQMISCGADKSIYFRSAQQASDGLHFVRTHHVAEKTT 631

  Fly   636 LYDMEVDSNAKHILTACQDRNVRVYGTQNAKQTKTFKGSHSDEGSLIKLSLDPSGIYVATSCTDK 700
            ||||::|...|::..||||||||||.|.:.||.|.:|||..|||||:|:.:||||.::||||:||
Mouse   632 LYDMDIDITQKYVAVACQDRNVRVYNTVSGKQKKCYKGSQGDEGSLLKVHVDPSGTFLATSCSDK 696

  Fly   701 TLAVYDYYSNECMARMYGHSELVTGLKFTNDCRHLISASGDGCIFIWQVPHDMIVTMQARM---- 761
            ::::.|:||.||:|:|:||||:|||:|||.||||||:.|||.|:|||.:..::...|:..:    
Mouse   697 SISLIDFYSGECVAKMFGHSEIVTGMKFTYDCRHLITVSGDSCVFIWHLGPEITTCMKQHLLEIN 761

  Fly   762 ---SQQRLR----SG------HAPLPRPLAPISP-------------PDGIVLESPTSEIEQPQL 800
               .||:.:    ||      :|..|..:..:||             |:.: |::|:.:...|  
Mouse   762 HQEQQQQPKDQKWSGPPSQETYASTPSEIRSLSPGEQTEDEMEEECEPEEL-LKTPSKDSLDP-- 823

  Fly   801 QPKFGVAERFSDVGQLPQWAMRKAAAD--SDSGAL------------------------------ 833
            .|:..:..     |:||.||.|....|  :||.|.                              
Mouse   824 DPRCLLTN-----GKLPLWAKRLLGDDDVADSSAFHAKRSYQPHGRWAERAEQEPLKTILDAWSL 883

  Fly   834 -SIPTP------------SGGSATVPGMHAASSMGNLSSSPSQQMTGL-------APRA--RGRW 876
             |..||            |.....:.|:.:..|:||..:||.:.:...       :|:.  ||..
Mouse   884 DSYFTPMKPENLQDSVLDSVEPQNLAGLLSECSLGNGHTSPGEGLVSYLLHPELGSPKEDNRGHP 948

  Fly   877 AQRSTQLETADDLRSNSESPLGTVSSVGGHSGVNVQTSDYNSASSKDITYNQTYLSEDSSIDSGM 941
            :....|.|..:.......||...||..|.|                     :.|..|::  ::|.
Mouse   949 SYLPLQREATEASELILCSPEAEVSLTGMH---------------------REYYEEET--EAGP 990

  Fly   942 ETRRGELKFIGSSNNGTVVTVSSVSS------------------IAVSASNGAMSTGSG------ 982
            |.::|:          |.:.||||||                  ...:|.:.|..|..|      
Mouse   991 EDQQGD----------TYLRVSSVSSKDQSPPEDSGESEAELECSFAAAHSSAPQTDPGPHLTMT 1045

  Fly   983 ------AAQQRLQLPDKRLKPGL-----------------RFDTHT---------------HDHD 1009
                  .:.:.|..|:   .|||                 .|:|.|               |...
Mouse  1046 AGKPEYPSTEELSQPE---LPGLGNGSLPQTPEQEKFLRHHFETLTDAPTEGPMGIFLELFHGSL 1107

  Fly  1010 GDVEDISDGERTSSDHGMFYNNLAPSTPTDFKVTAMNEDELRKSVRRQKFEKSGLQLTPSALS-G 1073
            ||:: ||:.|.       ::.|...|..|.|.      ..|:|:.|........|..:|.|.. |
Mouse  1108 GDIK-ISETED-------YFFNPRLSISTQFL------SRLQKTSRCPPRLPLHLMKSPEAQPVG 1158

  Fly  1074 NGSSH------TASTGTGTSDTEDEGSTPSAENAERSLA---STLGGSSENLPQSSTNSFLHAAL 1129
            .|.:.      .|.||..:||..:..|...||..:.:|:   ..|.|.:..:|.||         
Mouse  1159 QGGNQPKAGPLRAGTGYMSSDGTNVLSGQKAEETQEALSLLVPPLSGLTSCVPPSS--------- 1214

  Fly  1130 PEGPGLTTPMERGGSSRRSISAKHNTENGKSVAAP------PTITKSYTSTKKEELLQVINKVKQ 1188
                  ..|.:|...:..|:.   .|...:|::||      .:.|.|:..|.:...|        
Mouse  1215 ------VPPTDRKPPTPTSVL---TTGREQSISAPSSCSYLESTTSSHAKTTRSISL-------- 1262

  Fly  1189 QLENGTRKNGNTRLNAIAEVG---HRPLRGSHSISDLSLAANLDGSRNAGGGPGRYQKPVDSHDT 1250
                     |::.....||:.   |:||.....:..:.....|..|             :..|:.
Mouse  1263 ---------GDSEGPVTAELPQSLHKPLSPGQELQAIPTTVALTSS-------------IKDHEP 1305

  Fly  1251 SQYTSPQNTTATAAPTNT-----QQQIQPPVQQQYQIPKEP---HQQAQQQHQQYAPPA 1301
            :. .|..|..|.|:...|     :|.:.||       |:||   |..:|:...  .||:
Mouse  1306 AP-LSWGNHEARASLKLTLSSVCEQLLSPP-------PQEPPITHVWSQEPVD--VPPS 1354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 <73..236 CDD:441893 79/162 (49%)
WD40 repeat 73..107 CDD:293791 13/33 (39%)
WD40 repeat 113..161 CDD:293791 16/47 (34%)
WD40 156..573 CDD:475233 203/422 (48%)
WD40 repeat 167..207 CDD:293791 22/39 (56%)
WD40 repeat 209..285 CDD:293791 41/77 (53%)
WD40 repeat 303..338 CDD:293791 13/34 (38%)
WD40 repeat 353..407 CDD:293791 22/53 (42%)
WD40 <437..750 CDD:441893 176/319 (55%)
WD40 repeat 505..540 CDD:293791 15/34 (44%)
WD40 repeat 546..586 CDD:293791 26/39 (67%)
WD40 repeat 591..631 CDD:293791 24/43 (56%)
WD40 repeat 637..672 CDD:293791 19/34 (56%)
WD40 repeat 679..717 CDD:293791 20/37 (54%)
WD40 repeat 723..749 CDD:293791 19/25 (76%)
Wdr62XP_011248842.1 WD40 <94..445 CDD:441893 162/352 (46%)
WD40 repeat 118..154 CDD:293791 15/35 (43%)
WD40 repeat 159..195 CDD:293791 14/35 (40%)
WD40 repeat 203..237 CDD:293791 17/33 (52%)
WD40 repeat 255..286 CDD:293791 17/32 (53%)
WD40 repeat 292..342 CDD:293791 16/49 (33%)
WD40 <365..745 CDD:441893 196/387 (51%)
WD40 repeat 365..403 CDD:293791 11/37 (30%)
WD40 repeat 446..480 CDD:293791 15/34 (44%)
WD40 repeat 497..532 CDD:293791 12/37 (32%)
WD40 repeat 538..579 CDD:293791 19/40 (48%)
WD40 repeat 585..627 CDD:293791 28/41 (68%)
WD40 repeat 632..668 CDD:293791 16/39 (41%)
WD40 repeat 676..713 CDD:293791 20/36 (56%)
PHA03247 <1027..1533 CDD:223021 65/318 (20%)

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