DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr62 and wdr-62

DIOPT Version :10

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:NP_001343681.1 Gene:wdr-62 / 179326 WormBaseID:WBGene00019237 Length:1657 Species:Caenorhabditis elegans


Alignment Length:1891 Identity:426/1891 - (22%)
Similarity:741/1891 - (39%) Gaps:420/1891 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 KLKKVLGLTVCSNAALDVSPVSGLLAYPAGCTVVLFN--AKRQTQAYLVNTSRKAFTSVAFSRCG 121
            :||.|:|.:..:...:.:...|..|...||.::::.:  :..:.:.:|::.:::.||.||.:.||
 Worm    10 RLKNVVGRSGVTVNGIALHHASDTLLQVAGSSIIVSSTASHDRFEGHLISQTKQQFTCVAVTSCG 74

  Fly   122 RYVATGECGINPAIKVWELETPNGSLEHCSGGSVVAEFVDHKYAVTCVAFSPTGKYLVSVGSQHD 186
            :|.||||.|..||:::|:|....|:..    |.:|.....|..::|.|.|:|....|:|:|.|||
 Worm    75 KYAATGETGHQPAVRLWQLRDAQGNFV----GRLVRSMQSHTVSITIVRFTPDDSTLISIGCQHD 135

  Fly   187 MIVNVFDWRANLKMASNKISSKVAAVCFSEDGSYFVTVGNRHVKYWYL----EGGRKYKDPIPLM 247
            ..:..:|||....:...|:.|.|.|:..|.|.|..||||::.||||:|    :|..|...   |.
 Worm   136 AQIFTWDWRTGHDLGVGKLMSPVNALTISFDSSMCVTVGSKSVKYWFLPLASDGMNKRTG---LT 197

  Fly   248 GRSAILGDLRDNDFCAVACGKGICAEST---YAITRQGHLVEFSSRRLLDKWVQCRT------TN 303
            .|||||.|.|:.:|...|    .| :||   ..:|..|.::||:..:   |:|:|.|      ..
 Worm   198 SRSAILADKRNVNFVDAA----FC-DSTNRMVTVTSSGEILEFNGNK---KYVKCYTWKESGDFK 254

  Fly   304 ANCICVNERFILVGCAESIIRIF--NSATLEYVTTL-PRTHYLGVDVAQGIQINHIMSVPQQAKF 365
            |.||......:||||::.::|:|  ....|:::..| |.|| |..|.:.......:.:.|:.|.|
 Worm   255 AICIARVPEGLLVGCSDGLVRLFCLIGDDLDFLADLAPPTH-LFQDPSNVYDPQQLQNHPEDAIF 318

  Fly   366 PDCIAMVFDEQRSKVSCVYNDHSLYIWDLRDISRVGKSHSF----LYHSTCIWGVETVPYNVERE 426
            |:...:|...........|.|.||.     :.:|..||.||    |.|:..:..:|..|     .
 Worm   319 PEPRCLVASSSSPTFVVGYADRSLI-----EFARENKSWSFRRASLGHTGSVNCIEPFP-----S 373

  Fly   427 PSQTLPEECFVTCSSDDTIRVWGLDGCTNNDIYRRNIYSKELLKIVYSDDELQFIKDQGSSLFDK 491
            .|..||....:|..||.|||.|..:|.:.:.....||....|||:::.|:....:.|:.:  .:.
 Worm   374 SSPCLPIGTLITGGSDGTIRFWNFNGDSEDKKEIANILCPSLLKVIFLDENPDLLVDKRN--LES 436

  Fly   492 AGNSSYDGR----NGVRCIKISPELQHLASGDRCGNIRV--YSLVNLRLLTTIEAHESEVLCLEY 550
            .|.|:.:.:    :||.|.::|.:.:.|.:|...|.:.:  .|..:..::..|.||:.:|..:::
 Worm   437 VGPSNDENQSASSSGVLCTRVSHDGRMLIAGTATGMLYIVDLSFSDTPIIDVINAHDHDVTSIDF 501

  Fly   551 SNEKIERK-----LLASASRDRLIHVF---DVAQNYLLLQTLDDHSSSITSIKFVGAGLNFQMIS 607
            |:......     .|||..|||.:|||   ..:..::....||.|.|:|.||||........:.:
 Worm   502 SDHASTSSHDHPIFLASGGRDRFVHVFRRIPYSSQFVHCAVLDGHQSAIKSIKFASNNGQLHLYT 566

  Fly   608 CGADKSIM---FRSF--QGNIFMRGTNTSGKTTLYDMEVDSNAKHILTACQDRNVRVYGTQNAKQ 667
            ..:|:|::   ..||  |...|.|....|..:::.||....:....:.|..||.:|.:.. |.|.
 Worm   567 AASDRSLIIWKLSSFSDQHCEFTRVQMISVASSIGDMNFIKHVDLFVVAGHDRMLRQFDI-NGKT 630

  Fly   668 TKTFKGSHSD---EGSLIKLSLDPSGIYVATSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFT 729
            .:..||:..|   .|.::|:::|.||.|..:.|:||.:.|.|..|..|:|.:.|.....|...|:
 Worm   631 VREVKGTDDDVAHSGKILKVAIDHSGSYAISVCSDKFVYVTDLRSGVCLAVLCGFGAPATDATFS 695

  Fly   730 NDCRHLISASGDGCIFIWQVPHDM---IVTMQAR-MSQQRLRSGHAPLPRPLAPISPPDGIV--- 787
            :|.:::|..:.:|.|||||:..::   :::.|.| |.:..:|:            :.||.::   
 Worm   696 DDFKNVIVTTSNGSIFIWQLAKNLTERMISAQVRLMEEVTMRT------------ATPDSLLGSG 748

  Fly   788 ---LESPTSEIEQPQLQPKF--GVAERFSDVGQLPQWAMRKAAADSDSGALSIPT---------P 838
               :...::...:|...|:|  ..|..:||              |.||...|...         |
 Worm   749 SETISGDSNSFGRPLGAPEFSGSSASLYSD--------------DDDSTRFSSSVRSSRTKRILP 799

  Fly   839 SGGSATVPGMHAASSMGNLSSSPSQQMTGLAPRARGRWAQRSTQLETADDLRSN-SESPLGTVSS 902
            :||.  :.|..:.:.:|:.|.||:.|.   ||....|   ..|.|.:.|...:: ||:....|||
 Worm   800 NGGH--LIGDSSYARVGDSSFSPAVQS---APAVERR---THTNLFSHDQYETDVSETQSDFVSS 856

  Fly   903 VGGHSGVNVQTSDYNSASSKDITYNQTYLSED-SSIDSGMETRRGELKFIGSSNN--------GT 958
            .......:.:..|.|..|::   |....::|| .|....:...:.:|:...||.:        |.
 Worm   857 RRKTRLFSDEDQDSNLGSAQ---YLAAPINEDRRSASPSLYPPQDQLRGYQSSKSMMNLRDVTGG 918

  Fly   959 VVTVSSVSSIAVSASNGAMSTGSGAAQQRLQL-PDKRLKPG-LRFDTHTHD-HDG---DVEDISD 1017
            .|.|.:...:.:|......::.||::...... ...|:|.| :...::.:| |..   |:..:|.
 Worm   919 GVRVQTAKELMMSQIASQRNSQSGSSSHLSSTNTSGRMKWGDMPQQSNNNDWHPSSTVDIHHVSP 983

  Fly  1018 GERTS------------SDHGMFY--------NNLAPSTPTDFKVTAMNEDEL------------ 1050
            ...||            .|||..|        ..|||.|.:....||.::..|            
 Worm   984 VMATSMIPPQTQHQYGYRDHGTSYPMPDSTHPPPLAPRTTSRVLSTAPSQQALQQIQASSPFRRK 1048

  Fly  1051 ---RKSVRRQKFEKSGLQ----LTPSALSGNGSSHTASTGTGTSDTEDEGSTPSAENAERSLAST 1108
               |.|:.|:..|..|.|    .:||||:..|:                   |...|:....|:.
 Worm  1049 SMDRNSLSRRFLENGGAQPKTVWSPSALANQGA-------------------PRRSNSNLFAATN 1094

  Fly  1109 LGGSSENLPQSSTN-SFLHA-ALPEGPGLTTPMERGGSSRRSISAKHNTENGKSVAAPPTITKSY 1171
            |     .:|.:||| |..|. ..|:....||.::     .|.||...........|        .
 Worm  1095 L-----EVPPTSTNLSRRHTDKQPQKLRFTTTVQ-----TREISLDDEVVESDDDA--------I 1141

  Fly  1172 TSTKKEELLQVINKVKQQLENGTRKNGNTRLNA-IAEVGHRPLRG-----SHSISDLSLAANLDG 1230
            |||..|.      |.|.::  |.|:.....::. .|:|..|.:.|     |....||:.|::|  
 Worm  1142 TSTTFEP------KYKNRI--GYRRPSTVTVDTRDADVARRRVAGTSFKKSDRADDLNFASSL-- 1196

  Fly  1231 SRNAGGGPGRY--QKPVDSHDTSQYTSPQNTTATAAPTNTQQQIQPPVQQQYQIPKEPHQQAQQQ 1293
             |:....|.::  .:.::|.||.  :||.:||.::.       :...:||:.:.....:.::..:
 Worm  1197 -RSRSQSPNKFALSQMINSRDTP--SSPSSTTGSSI-------VGRNLQQRRRGSDVSYVRSATR 1251

  Fly  1294 HQQYAPPASQQFFNCAAPKSKLQQNFQTMRQVQQHYPPYPHHVGVHQIHPPPGVPFGGSAAGSTS 1358
            .:.....::.......|.:|||.|:.:.:|:..::.                      :...:..
 Worm  1252 GRDEMRKSTDALNKLMAVRSKLHQSSENLRKSTENL----------------------ALLKNLE 1294

  Fly  1359 AMRSHSQPQNRQQQQQQQQQRAKRNPAGNNRRTPSILKHYKSCPVSPVHEEVEWSAEGNERGALL 1423
            ...:||.|            :|:...:.|.|...:                             |
 Worm  1295 EASNHSTP------------KARTRSSSNLRNADN-----------------------------L 1318

  Fly  1424 GEPKRHSVYADDARTILDMIHADTEKMIDE--ITRKYGDLDEPGIPASYSMPANLRNLGGLGSTG 1486
            |..:....:..|:|    |....|..:...  :.|..|:|::              :|...||..
 Worm  1319 GNMESFGTFDADSR----MKSGSTSSLAHSRMMARSIGNLND--------------SLAMEGSNN 1365

  Fly  1487 DSTPTGRTTQYYVYREFYQCERKVSLSDILQPEQF-------------AASQRRLDEARFLETQR 1538
            ..:|:.|..      ...|..||.|..|:..||||             .|.|::::..|    .:
 Worm  1366 YDSPSQRLA------NTIQMMRKASNPDLTAPEQFEDTGSPFAQRMARGAVQKKMERYR----AK 1420

  Fly  1539 HSSASFFLTGQQSQESLSLLSDGDGPGSYCNSLESVLSDESDCQSAPLEYPQTQVAVLQQRHAGI 1603
            :.|.:.....|.|:|                      ||.::....||...:..:....:...| 
 Worm  1421 NKSGNVVGRNQTSEE----------------------SDSNNSDMMPLSINKRALTAGNRSTTG- 1462

  Fly  1604 RNFIIHGPVSKSYGNSPNAYGSFDYYMRQQHSTTTDSFDVTGYNLEPL-KPLPSS-KTYPRIAQV 1666
            .:|   .|.| |.|:|..|.||                       .|: ..|||| :.|.:...|
 Worm  1463 SDF---SPAS-SRGSSSLAMGS-----------------------GPIGSGLPSSRRLYDQQRSV 1500

  Fly  1667 QASENIPTLRSKN---KQYTSGVNKSL-STDFAQQRQQRNSNPMQSGDNLFVRKPLKPKPPVPAK 1727
            .:|...|.....|   .:.:..:|||: ..|.......|:|.......||........|.|:...
 Worm  1501 LSSSGTPRRTGNNYLVTKMSEQMNKSMEGPDLGSDESPRSSVNSHEWQNLMENSQDGTKNPLICH 1565

  Fly  1728 PHNLVSTLS-HMEK--QQKQKSQSRTASVVQQFEHNLQKFEKEKQR--EREQQRRPAMRSSVSSG 1787
            ..:.:..|. |::|  |.|:..:..|:..::|.:..:.:.::..:|  |:....:.:..:..|:|
 Worm  1566 VQDCMEQLRIHVDKSLQAKKLVEDDTSLAMEQKKIVMCEIDRSIERLIEKLAPNQLSRSNDRSNG 1630

  Fly  1788 ALAGGS 1793
            .::.|:
 Worm  1631 NVSVGN 1636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 <73..236 CDD:441893 54/168 (32%)
WD40 repeat 73..107 CDD:293791 5/35 (14%)
WD40 repeat 113..161 CDD:293791 18/47 (38%)
WD40 156..573 CDD:475233 130/450 (29%)
WD40 repeat 167..207 CDD:293791 14/39 (36%)
WD40 repeat 209..285 CDD:293791 31/82 (38%)
WD40 repeat 303..338 CDD:293791 11/37 (30%)
WD40 repeat 353..407 CDD:293791 14/57 (25%)
WD40 <437..750 CDD:441893 92/334 (28%)
WD40 repeat 505..540 CDD:293791 7/36 (19%)
WD40 repeat 546..586 CDD:293791 11/47 (23%)
WD40 repeat 591..631 CDD:293791 12/44 (27%)
WD40 repeat 637..672 CDD:293791 8/34 (24%)
WD40 repeat 679..717 CDD:293791 14/37 (38%)
WD40 repeat 723..749 CDD:293791 9/25 (36%)
wdr-62NP_001343681.1 WD40 10..399 CDD:441893 125/414 (30%)
WD40 repeat 66..110 CDD:293791 18/47 (38%)
WD40 repeat 115..151 CDD:293791 13/35 (37%)
WD40 repeat 159..202 CDD:293791 18/45 (40%)
WD40 repeat 209..248 CDD:293791 13/46 (28%)
WD40 repeat 256..310 CDD:293791 15/54 (28%)
WD40 repeat 317..342 CDD:293791 5/24 (21%)
WD40 <355..716 CDD:441893 99/368 (27%)
WD40 repeat 366..409 CDD:293791 13/47 (28%)
WD40 repeat 453..491 CDD:293791 7/37 (19%)
WD40 repeat 496..545 CDD:293791 12/48 (25%)
WD40 repeat 551..595 CDD:293791 11/43 (26%)
WD40 repeat 600..636 CDD:293791 8/36 (22%)
WD40 repeat 648..682 CDD:293791 13/33 (39%)

Return to query results.
Submit another query.