DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and wdr-5.1

DIOPT Version :10

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:NP_497749.1 Gene:wdr-5.1 / 175474 WormBaseID:WBGene00006474 Length:376 Species:Caenorhabditis elegans


Alignment Length:352 Identity:75/352 - (21%)
Similarity:133/352 - (37%) Gaps:107/352 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 TCSSDDTIRVWGLDGCTNNDIYRRNIYSKEL--LKIVYSDDELQFIKDQGSSLFDKAGNSSYDGR 500
            |.|:|.|:::|.:|    :.|..|.:...:|  ..|.:|.|.                       
 Worm   104 TSSADKTVKIWNMD----HMICERTLTGHKLGVNDIAWSSDS----------------------- 141

  Fly   501 NGVRCIKISPELQHLASGDRCGNIRVYSLVNLRLLTTIEAHESEVLCLEYSNEKIERKLLASASR 565
               ||: :|      ||.|:  .::::.:|..|:..|::.|.:.|.|..::.:.   .|:.|.|.
 Worm   142 ---RCV-VS------ASDDK--TLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQS---SLVVSGSF 191

  Fly   566 DRLIHVFDVAQNYLLLQTLDDHSSSITSIKFVGAGLNFQMISCGADKSIMFRSFQGNIFMRGTNT 630
            |..:.::|| :..:.::||..||..::::.|                                |.
 Worm   192 DESVRIWDV-KTGMCIKTLPAHSDPVSAVSF--------------------------------NR 223

  Fly   631 SGKTTLYDMEVDSNAKHILTACQDRNVRVYGTQNAKQTKTFKGSHSDEGSLIKLSLDPSGIYVAT 695
            .|..             |.:...|..||::.|.|.:..||.....:...:.:|.|  |:|.|:..
 Worm   224 DGSL-------------IASGSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFS--PNGKYILA 273

  Fly   696 SCTDKTLAVYDYYSNECMARMYGHSE---------LVTGLKFTNDCRHLISASGDGCIFIWQVPH 751
            |..|.||.::|:...:.:.:..||..         .|||.|:      :||.|.|..|:||.:..
 Worm   274 SNLDSTLKLWDFSKGKTLKQYTGHENSKYCIFANFSVTGGKW------IISGSEDCKIYIWNLQT 332

  Fly   752 DMIVTMQARMSQQRLRSGHAPLPRPLA 778
            ..||......:|..|.|...|:...:|
 Worm   333 REIVQCLEGHTQPVLASDCHPVQNIIA 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 <73..236 CDD:441893
WD40 repeat 73..107 CDD:293791
WD40 repeat 113..161 CDD:293791
WD40 156..573 CDD:475233 28/136 (21%)
WD40 repeat 167..207 CDD:293791
WD40 repeat 209..285 CDD:293791
WD40 repeat 303..338 CDD:293791
WD40 repeat 353..407 CDD:293791
WD40 <437..750 CDD:441893 68/322 (21%)
WD40 repeat 505..540 CDD:293791 8/34 (24%)
WD40 repeat 546..586 CDD:293791 9/39 (23%)
WD40 repeat 591..631 CDD:293791 2/39 (5%)
WD40 repeat 637..672 CDD:293791 8/34 (24%)
WD40 repeat 679..717 CDD:293791 10/37 (27%)
WD40 repeat 723..749 CDD:293791 11/25 (44%)
wdr-5.1NP_497749.1 PRK13914 <2..>96 CDD:237555
WD40 79..373 CDD:238121 75/352 (21%)
WD40 repeat 90..127 CDD:293791 8/26 (31%)
WD40 repeat 133..169 CDD:293791 12/70 (17%)
WD40 repeat 174..210 CDD:293791 9/39 (23%)
WD40 repeat 217..252 CDD:293791 11/79 (14%)
WD40 repeat 259..295 CDD:293791 10/37 (27%)
WD40 repeat 303..340 CDD:293791 13/42 (31%)
WD40 repeat 346..372 CDD:293791 4/14 (29%)
Blue background indicates that the domain is not in the aligned region.

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