DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and NEDD1

DIOPT Version :10

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:NP_001128647.1 Gene:NEDD1 / 121441 HGNCID:7723 Length:667 Species:Homo sapiens


Alignment Length:805 Identity:157/805 - (19%)
Similarity:282/805 - (35%) Gaps:226/805 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 LEYSNEKIERKLLASASRDRLIHVFDVAQNYLLLQTLDDHSS--SITSIKFVGAGLNFQMISCGA 610
            :.::...::..|..::|.|. |.::| |.:..|:...:.|:|  .|:||             |.:
Human     1 MHFTGAVMQENLRFASSGDD-IKIWD-ASSMTLVDKFNPHTSPHGISSI-------------CWS 50

  Fly   611 DKSIMFRSFQGNIFMRGTNTSGKTTLYDMEVDSNAKHILTACQDRNVRVYG-TQNAKQTKTFKGS 674
                     ..|.|:...::||.            |.::::|:.:.|.:.. .:..|||      
Human    51 ---------SNNNFLVTASSSGD------------KIVVSSCKCKPVPLLELAEGQKQT------ 88

  Fly   675 HSDEGSLIKLSLDPSGIYVATSCTDKTLAVYDYYSNECMARMYGHSELVTGLKFT-NDCRHLISA 738
                    .::|:.:.:|:.:...:.|:.::|..|......:..|.:.||.:.:. ||| ::.|.
Human    89 --------CVNLNSTSMYLVSGGLNNTVNIWDLKSKRVHRSLKDHKDQVTCVTYNWNDC-YIASG 144

  Fly   739 SGDGCIFIWQVPHDMIVTMQARMSQQRLRS-GHAPLPRPLAPISPPDGIVL------ESPTSEIE 796
            |..|.|.:..|..::..|.....|.|.:|. .::...:.|......:|||.      :||....:
Human   145 SLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNSQSPYHNFD 209

  Fly   797 QPQLQPKFGVAERFSDVGQL-----------------PQWAMRKAAADSDSGALSIPTPSGGSAT 844
            .....|..|:.  ||.|.:|                 .:..::...||:...|:.. .|.|.:..
Human   210 SVHKAPASGIC--FSPVNELLFVTIGLDKRIILYDTSSKKLVKTLVADTPLTAVDF-MPDGATLA 271

  Fly   845 VPGMHAASSMGNLSSSPSQQMTGLAPRARGRWAQRSTQLETADDLRSNSESPLGTVSS------- 902
            :     .||.|.:...                           |||. .:||:.|:|:       
Human   272 I-----GSSRGKIYQY---------------------------DLRM-LKSPVKTISAHKTSVQC 303

  Fly   903 -VGGHSGVNVQTSDYNSASSKDITYNQTYLSEDSSIDSGMETRRGELKFIGSSNNGTV--VTVSS 964
             ...:|.|..::|.....|:|..|.|:..::.:::  ||           |..|:|.|  ...:|
Human   304 IAFQYSTVLTKSSLNKGCSNKPTTVNKRSVNVNAA--SG-----------GVQNSGIVREAPATS 355

  Fly   965 VSSIAVSASNGAMSTGSGAAQQRLQLPDKRLKPGLRFDTHTHDHD-GDVEDISDGERT--SSDHG 1026
            ::::.......||..|:.|.|::..||     ..:..||.:.:.| |..:|.|..:.|  ||...
Human   356 IATVLPQPMTSAMGKGTVAVQEKAGLP-----RSINTDTLSKETDSGKNQDFSSFDDTGKSSLGD 415

  Fly  1027 MFYNNLAPSTPTDFKVTAMNEDELRKSVRRQKFEKSGLQLTP---SALSGNGSSHTASTGTGTSD 1088
            ||      |...|..|.....||   |:.:    ..|....|   |......:..|:||....|.
Human   416 MF------SPIRDDAVVNKGSDE---SIGK----GDGFDFLPQLNSVFPPRKNPVTSSTSVLHSS 467

  Fly  1089 TED--EGSTPSAENAERSLASTLGGSSENL---PQSSTNSFLHAALPEGPGLTTPMERGGSSRRS 1148
            ..:  .||....||..|.|.:    .|:.:   .|.|.:||...|     .|.|.....|:...|
Human   468 PLNVFMGSPGKEENENRDLTA----ESKKIYMGKQESKDSFKQLA-----KLVTSGAESGNLNTS 523

  Fly  1149 ISAKHNTENGKSVAAPPTITKSYTSTKKEELLQVINKVKQQLENGTRKNGNTRLNAIAEVGHRPL 1213
            .|: :.|.|.:....|.                  |:::.||                 :...|:
Human   524 PSS-NQTRNSEKFEKPE------------------NEIEAQL-----------------ICEPPI 552

  Fly  1214 RGSHSISDLSLAANLDGSRNAGGGPGRYQKPVDSHDTSQYTSPQNTTATAAPTNTQQQI------ 1272
            .|| |..:..:|:::    .||......:|..||...::..:|..:.......|..|:.      
Human   553 NGS-STPNPKIASSV----TAGVASSLSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFRE 612

  Fly  1273 ---QPPVQQQYQIPKEPHQQAQQQH 1294
               :..|..|.::.|:.|.|..:.|
Human   613 ACHRDIVNLQVEMIKQFHMQLNEMH 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 <73..236 CDD:441893
WD40 repeat 73..107 CDD:293791
WD40 repeat 113..161 CDD:293791
WD40 156..573 CDD:475233 4/24 (17%)
WD40 repeat 167..207 CDD:293791
WD40 repeat 209..285 CDD:293791
WD40 repeat 303..338 CDD:293791
WD40 repeat 353..407 CDD:293791
WD40 <437..750 CDD:441893 38/205 (19%)
WD40 repeat 505..540 CDD:293791
WD40 repeat 546..586 CDD:293791 7/37 (19%)
WD40 repeat 591..631 CDD:293791 6/39 (15%)
WD40 repeat 637..672 CDD:293791 6/35 (17%)
WD40 repeat 679..717 CDD:293791 5/37 (14%)
WD40 repeat 723..749 CDD:293791 9/26 (35%)
NEDD1NP_001128647.1 WD40 31..306 CDD:238121 64/359 (18%)
WD40 repeat 44..81 CDD:293791 11/70 (16%)
WD40 repeat 88..124 CDD:293791 6/49 (12%)
WD40 repeat 130..167 CDD:293791 10/37 (27%)
WD40 repeat 172..209 CDD:293791 7/36 (19%)
WD40 repeat 217..253 CDD:293791 5/37 (14%)
WD40 repeat 258..295 CDD:293791 12/70 (17%)
Blue background indicates that the domain is not in the aligned region.

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