DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr62 and si:ch73-174h16.5

DIOPT Version :10

Sequence 1:NP_001259886.1 Gene:Wdr62 / 33367 FlyBaseID:FBgn0031374 Length:2397 Species:Drosophila melanogaster
Sequence 2:XP_021333610.2 Gene:si:ch73-174h16.5 / 100003472 ZFINID:ZDB-GENE-160728-123 Length:1084 Species:Danio rerio


Alignment Length:750 Identity:138/750 - (18%)
Similarity:253/750 - (33%) Gaps:257/750 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 IKVWELETPNGSLEHCSGGSVVAEFVDHKYAVTCVAFSPTGKYLVS-------------VGSQHD 186
            |:||.   |:..|:.|        ||.|...||.:|..|....|:|             || .|.
Zfish    93 IRVWR---PDWELQMC--------FVGHTALVTSLALCPVSGLLLSSSLDGTVRCWSPEVG-DHV 145

  Fly   187 MIVNVFDWRANLKMASNKISSKVAAVCFSEDGSYFVTVGNRHVKYW------YLEGGRKYKDPIP 245
            .||::          .|:.|..: .:..|:..:.|.:.....|.:|      ||.....:.:.:|
Zfish   146 QIVSI----------PNECSPPL-IMGGSDSAANFFSYSTNSVDFWTFNCLYYLHCRLDWVNRLP 199

  Fly   246 LMGRSAILGDLRDNDFCA-VACGKGICAESTYAITRQGHLVEFSSRRLLDKWVQCRTTNANCICV 309
            :   ..|........|.| |.|..|....:..|..:...|..|.::..    |.|    |:| ||
Zfish   200 I---CQISTPPNPPSFQACVVCTHGNSNITVVAADKDAVLTRFQTKGK----VVC----ADC-CV 252

  Fly   310 NERFILVGCAESIIRIFNSATLEYVTTLPRTHYLGVDVAQGIQINHIMSVPQQAKF--PDCIAMV 372
            .::.:||...:.::.|  ::||....|: :..:.|::..:|      .|...:||.  ..|:.:.
Zfish   253 PKKILLVLTEDGVVTI--ASTLTSPITI-QDEWRGIERWEG------PSGQTEAKIGTVSCMVLY 308

  Fly   373 FD----------EQRS----KVSCVYNDHSLYIWDLRDISRVGKSHSFLYHSTCIWGVETVPYNV 423
            :|          .||:    |:..:::::...:    .:..:|...|.|..::......|..:|.
Zfish   309 YDITDKEWESLQTQRAHKPKKIRLLHDENRFLV----ILGHLGGYVSVLNMNSAKVQFRTSAHNN 369

  Fly   424 EREPS-QTLPEECF-VTCSSDDTIRVWGLDGCTNNDIYRRNIYSKELLKIVYSDDELQFIKDQGS 486
            :...| |..|:..| :|...|..:.||.:..|           :|:.|.:.:|            
Zfish   370 KNINSMQAYPDSGFLLTAGEDKAVLVWRVFPC-----------AKQCLSLHFS------------ 411

  Fly   487 SLFDKAGNSSYDGRNGVRCIKISPELQHLASGDRCGNIRVYSLVNLRLLTTIEAHESEVLCL--- 548
                            |.|  ..|.:             :.:|:..:|:..:|..|::...|   
Zfish   412 ----------------VLC--DHPPV-------------LLALLGTQLILALEDPENKTDSLVQH 445

  Fly   549 ------EYSNEKIERK--------------LLASASRDRLIHVFDVAQNYLLLQTLDDHSSSITS 593
                  .|..:..||.              :.||:|:|..:.::|:..  .||:.|:        
Zfish   446 SLDSQTRYDQQPSERHHKKITGLCACCQLGVFASSSQDETVRIWDMKN--CLLRILE-------- 500

  Fly   594 IKFVGAGLNFQ---MISCGADKSIMFRSFQGNIFMRGTNT-----SGKTTLYDMEVD------SN 644
                   ||.:   :..||....::. ...|::: |..||     ..:|...|.:.:      ::
Zfish   501 -------LNAEPECLAYCGESGDLLL-GITGDLY-RIPNTHLLPPDCRTQKCDPDTELPKSWNTS 556

  Fly   645 AKHILTACQDRNVRVYGTQNAKQTK-----TFKGSHSDEGSLIKLSLDPSGIYVATSCTDKTLAV 704
            .|..:.:|  ..:|..|.::...||     .|...|.|..||.|..::         |..|.:|.
Zfish   557 LKSRMESC--CFIRKDGPKSLDYTKDPDFGVFMARHKDLESLRKGEIE---------CRTKKIAT 610

  Fly   705 ----YDYYSNECMARMYGHSELVTGLKFTNDCRHLISASGDGCIFIWQVPHDMIVTMQARMSQQR 765
                .:.:|| .::::|         :...|.|               :|.||..........: 
Zfish   611 VQTKQEAFSN-YLSKIY---------RQPLDIR---------------IPEDMFEICSLLFPPK- 649

  Fly   766 LRSGHAPLPRPLAPISPPDGIVLESPTSEIEQPQL 800
                |..|| ||.|          ...|::::.||
Zfish   650 ----HPELP-PLPP----------KRQSDLDEVQL 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr62NP_001259886.1 WD40 <73..236 CDD:441893 28/119 (24%)
WD40 repeat 73..107 CDD:293791
WD40 repeat 113..161 CDD:293791 7/25 (28%)
WD40 156..573 CDD:475233 86/477 (18%)
WD40 repeat 167..207 CDD:293791 11/52 (21%)
WD40 repeat 209..285 CDD:293791 14/82 (17%)
WD40 repeat 303..338 CDD:293791 10/34 (29%)
WD40 repeat 353..407 CDD:293791 10/69 (14%)
WD40 <437..750 CDD:441893 57/358 (16%)
WD40 repeat 505..540 CDD:293791 4/34 (12%)
WD40 repeat 546..586 CDD:293791 12/62 (19%)
WD40 repeat 591..631 CDD:293791 8/47 (17%)
WD40 repeat 637..672 CDD:293791 7/45 (16%)
WD40 repeat 679..717 CDD:293791 8/41 (20%)
WD40 repeat 723..749 CDD:293791 2/25 (8%)
si:ch73-174h16.5XP_021333610.2 None
Blue background indicates that the domain is not in the aligned region.

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