Protein Alignment chinmo and psq

DIOPT Version :10

• Sequence 1: NP_722717.2
• Gene: chinmo / 33343
• FlyBaseID: FBgn0086758
• Length: 840
• Species: Drosophila melanogaster
• Sequence 2: NP_001369078.1
• Gene: psq / 36118
• FlyBaseID: FBgn0263102
• Length: 1170
• Species: Drosophila melanogaster
• Alignment Length: 907
• Identity: 184/907 - (20%)
• Similarity: 301/907 - (33%)
• Gaps: 331/907 - (36%)

  Fly     5 QQFCLKWNSFSSNLAITFSNLFKSDLLADVILSCDGVVFKAHKLILAACSKKFADLFENTPTNGQ 69
            |.|.|:||::.:.:...|..|.:.....||.|||:....||||::|:|||..|..|....|....
  Fly     8 QYFSLRWNNYQNTMTSVFQQLREDLSFVDVTLSCEHGSLKAHKVVLSACSTYFQKLLLENPCKHP 72

  Fly    70 CVIILEATTPDNMAALLEFMYKGEVHVSQEALNSFLKSAESLQVKGLSTETGRLAAQQAQQHMGD 134
            .:|:.......::..:::|:|:||:.|::..|...|::||.|::|||.         :..::..|
  Fly    73 TIILPADIIFTDLKTIIDFVYRGEIDVTESELQGLLRTAEQLKIKGLC---------ETAENADD 128

  Fly   135 LSPLDSPTGRRSVRNSLSGG------SSSIVPGGVGIGL-------------------------- 167
            |:  |:.|...:|..::...      :::||||.....|
  Fly   129 LN--DAATATITVSENIQQAVVGNIVNAAIVPGAPSPSLEQQQQHHQQQQQQQAQEQHQQQQVHA 191

  Fly   168 -----------------GGGATGANSMSGMGIGNGLS-LAGMAAGGGMAAAANAAASSLSTLAAS 214
                             .|.::|:.|:||..:.:..| .:|..|||   ..|:...|.|......
  Fly   192 QQQQQQQQQINAALLTQHGVSSGSVSLSGQLLSSSASGSSGSLAGG---QQASQTPSGLQPTPRK 253

  Fly   215 ANIVDRCGSAGANIISGSAAGIGGSHSGGAGNGS-------------GTVGIGGNGVGS------ 260
            :.:.   .|...::.||..||    .|||:.:||             .|:.|.|....|
  Fly   254 SRLK---RSKSPDLSSGGGAG----SSGGSSSGSTQQQPQPAHHHHPQTILIQGQNPNSIVSLQQ 311

  Fly   261 -GGGNNGPISLGSG-------------AGAAHHLGGSTGILKQECDSLMHPGGSSSSSGMGYTHV 311
             ..||..|:| |||             .|..|..||.|                   .|.|::|
  Fly   312 TADGNYIPVS-GSGDDSDAEDHEHEHNHGHGHGHGGHT-------------------HGHGHSH- 355

  Fly   312 PPIYRPINYEPPRKRAIVRSPYSEQEQRGSVLRDGSKSSECPSPINKPPYHRPSSSASSTAPTEA 376
                             ..|...|.|                        |:|:....
  Fly   356 -----------------EHSHDHEHE------------------------HKPNKICK------- 372

  Fly   377 DTMHSERASPQSSRYENHSPSTTAGNGNATSSLERIV---------KSERNNGSANEANDDDREL 432
             |.||. |||.|:  .:.:.:..||....||:.:.||         |..:|..|.....
  Fly   373 -TEHSV-ASPASN--SSSASNNAAGVSGVTSTGQAIVTQIVVARDGKDTKNMTSLGMGM------ 427

  Fly   433 MDESTDNGAEDLRVKLENLKYSPPPPPNSNTSSTTPNTLLENLKADGTLSSNLAASIAPADMLNV 497
                  ||.. |.|.:..|.::|.||    ..|.||.|:.|::    .||.|  .|....|:.|.
  Fly   428 ------NGGL-LGVPMGFLDFTPEPP----APSATPVTVTEHV----DLSCN--PSTDTRDLSNT 475

  Fly   498 WNATKMNNKNSVNTADGKKLKCLYCDRLYGYETNLRAHIRQRHQGIRVPCPFCERTFTRNNTVRR 562
            .....::|.              ...:::..:.:....|...|.|..           .|:.:.:
  Fly   476 TEPLDIDNH--------------LAQQIHRLDQSPMHSISHHHTGDE-----------SNSNLVQ 515

  Fly   563 HIAREHKQEIGLAAGATIAPAHLAAAAAASAAATAAASNHSPXEAAATAAASVVMNANKEAAKQR 627
            ||    |.|:       |...||            ||.:|:. :|..       .:|:.:|.:|.
  Fly   516 HI----KSEV-------IEAKHL------------AAQHHALSQAQQ-------QHAHHQAHQQH 550

  Fly   628 KRKTLKMALEKCMQRRDAMVAETTTGAGGDGAEAGGESGEAVDGAGSEEGAGSEGTEPLTYEQQQ 692
            ::.    ..::..|::..:.|:...                         |.|:..:....:|||
  Fly   551 QQH----QQQQHQQQQQHLHAQQLL-------------------------AQSQLQQQQQQQQQQ 586

  Fly   693 QRMHQELTQQIRAAMAAEQAAEAMDSTMNTTVNTTTTTTTTTNTTGATSDGCSDAEASDGSDRPM 757
            |:.||:..||..||.||                        ....|  ..|.....|..|....|
  Fly   587 QQHHQQQQQQAAAAAAA------------------------AGVHG--QHGGHVTHADIGGATVM 625

  Fly   758 EVDEDQPPEPQPGSELVVVEPKI-EVLS-------ESEDEEDRLHMSEAEPDIQAEAIYDHM 811
            |:|..| .:.:||   :::.|:| .::|       .|:..||.:.::...|..|.|..|.::
  Fly   626 EIDPSQ-IKHEPG---MIITPEIVNMMSSGHMDMYNSDTSEDSMMIANGSPHDQKEPHYTNL 683

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
chinmo	NP_722717.2	BTB_POZ_BAB-like	31..115	CDD:349624	27/83 (33%)
		C2H2 Zn finger	519..540	CDD:275368	1/20 (5%)
		C2H2 Zn finger	547..568	CDD:275368	3/20 (15%)
psq	NP_001369078.1	BTB_POZ_BAB-like	34..118	CDD:349624	27/83 (33%)
		HTH_psq	717..>747	CDD:283007
		HTH_psq	767..804	CDD:283007
		HTH_psq	821..866	CDD:283007
		HTH_psq	873..916	CDD:283007