DRSC/TRiP Functional Genomics Resources

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Protein Alignment nis and Qrich2

DIOPT Version :10

Sequence 1:NP_608605.1 Gene:nis / 33337 FlyBaseID:FBgn0031347 Length:659 Species:Drosophila melanogaster
Sequence 2:NP_001403824.1 Gene:Qrich2 / 501747 RGDID:1562974 Length:3011 Species:Rattus norvegicus


Alignment Length:698 Identity:154/698 - (22%)
Similarity:244/698 - (34%) Gaps:176/698 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 EPAAEPPAEEAEAPPAPVEEPPA-ADPAPEPAPEPAPEPAAEEPAPAEPVPEEA----------- 136
            ||..:.|. ..:||..|.:|..| .:..||..|:..|:.|  |....|...|:|           
  Rat  2169 EPQPQLPL-MYQAPELPQKEDKARQETRPEVVPQIPPQKA--EAITVEVQSEQADLRYPDQARRV 2230

  Fly   137 ------------APAEAAAPSPEPVGSNHEPTPSA----------TPAPEEHPPSEPEADTSKAP 179
                        .||.|....|....:..:.||.:          ||:..|......|:....||
  Rat  2231 EADTQVTWDLRSKPASAVQLGPTVQTTKEQVTPDSRTQDSWSYLQTPSVSETRRERQESLEKLAP 2295

  Fly   180 MDVPAEAK-----GE------ELAPQASRVSSRSSGRDKSHSQTDGSLTNNLLRLERRLSKIELQ 233
             ..|...:     ||      ||..|...:....:|      |||......|:        ..|.
  Rat  2296 -SFPMAVETFRLIGEIVALYVELKEQLKDLDEEQAG------QTDWEKIQYLI--------ARLV 2345

  Fly   234 KEQATMEVQQFVSNLTS------QLKITMEQVNNMTHLLI----DRKPNPQRFRLLRHIAKQLRV 288
            |:....::.:.:.||.|      |.|..:|::.......|    |.||:        |::.||.:
  Rat  2346 KKTVPQDLPEQLKNLRSLNKEVRQDKAKLEKIQRFLDTDITGGKDVKPS--------HLSLQLGI 2402

  Fly   289 LMVTTGD---EVSVSWSSGDIVDGVEEEGLSEEEVPVESSAP---TEVEKPEEEEELELEQPLCY 347
            |.||..|   |::....|.|......|..:||..:.::....   |.:|.........|.  |..
  Rat  2403 LRVTVSDIEKELAELRESQDRGKAAMENSVSEASLYLQDQLDKLRTIIESMLSSSSALLS--LSI 2465

  Fly   348 SPEKMLTEL---------------LDLKSQFCALTNKVNEL------AAALLKQDSQRLMDQMKD 391
            :|.|.|..|               ||:..|...|..:..:|      .||.......:|..|.::
  Rat  2466 TPHKSLGTLVPGQIDPEATCPACSLDVSHQVSLLVQRYEQLQDMVTGLAASRPSKKAKLQGQDEE 2530

  Fly   392 LSETVRDIKLYMASNKEATNGMMTRLNDCVYQ----IQVLKKSASHLDEVKIDKTEVELLLAEKV 452
            |...|:...|.:..:.|..|...:.|.:...|    |:||.:....|::.|.::..:|:.:..|.
  Rat  2531 LLGHVQSAILQVQGDCEKLNITTSNLIEDHRQKQKDIEVLYQGIERLEKEKANRDHLEMEIDVKA 2595

  Fly   453 DFQQLATKVSLEQLEEYKARLEQMFCEVRHIVSLNEKNVLQIIDNL--RMTLGIDALELSLKDFR 515
            |...||:|||..|.:....:|..|..|:...:|..|::..:::|.|  .|...:|.|||.  ..:
  Rat  2596 DKSALASKVSRIQFDATTEQLNHMMQELVAKMSGQEQDWQKLLDKLLAEMDSKLDRLELD--PLK 2658

  Fly   516 EMIERRVQIIAEALQKYMEMTNDDCAAAAGRVKVMQDLACLACD----TTCVMRTVERSKVPSLP 576
            :.:|.|.:.:.:.|::...:...| .|||.|.:::....||:||    ||...:.:  |..|.:|
  Rat  2659 QTLEDRWKSLRQQLKERSPLYQAD-EAAAMRRQLLAHFHCLSCDRPLETTVTGQVL--SMTPIIP 2720

  Fly   577 NAKGSTGLGPIVTYELGQIRKS------------GIMGYYRKD---------------------- 607
            :..|...:.|...:||.|||:.            |.:....|.                      
  Rat  2721 SMPGHRSVRPYTVFELEQIRQQSRNLKLGSSFPRGDLSQMEKSVGRLRSMHSKMLMDIEKVQIHF 2785

  Fly   608 ------------EFPHST----SAWTKGASGVPMVKCT-PRHAGGSHT 638
                        |..||.    ..:.:||........| ||..|||||
  Rat  2786 GGSVKASSQMIRELLHSQCLSHPCYKRGADTTDYTYSTVPRRCGGSHT 2833

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nisNP_608605.1 DUF4795 379..562 CDD:464990 48/192 (25%)
Qrich2NP_001403824.1 PRK03918 <98..>266 CDD:235175
PksD <353..886 CDD:442550
Glutenin_hmw 638..1258 CDD:367362
Glutenin_hmw 1078..1738 CDD:367362
Glutenin_hmw 1451..2105 CDD:367362
YhaN 2279..>2692 CDD:443752 98/440 (22%)
DUF4795 2525..2704 CDD:464990 46/181 (25%)
Blue background indicates that the domain is not in the aligned region.

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