DRSC/TRiP Functional Genomics Resources

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Protein Alignment Charon and Nfkbie

DIOPT Version :10

Sequence 1:NP_608581.2 Gene:Charon / 33303 FlyBaseID:FBgn0031317 Length:524 Species:Drosophila melanogaster
Sequence 2:NP_001291885.1 Gene:Nfkbie / 18037 MGIID:1194908 Length:371 Species:Mus musculus


Alignment Length:237 Identity:62/237 - (26%)
Similarity:103/237 - (43%) Gaps:47/237 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 LTRDGEDCLELALTNDTDTEIVSL-------ILDARMMTDHLYENSNTALHLAVINHINIESIRL 355
            ::.||:..|.||:.::..:.:...       :||   :.::||:   |||||||  |::...:  
Mouse   119 ISEDGDTLLHLAVIHEAPSVLFCCLAFLPQEVLD---IQNNLYQ---TALHLAV--HLDQPDV-- 173

  Fly   356 LLRRIDLN--SLLLTNDDGYTVLHLAVRNNQFLVVEAILDSIDE--RELGETVYRRTLEAANPNE 416
             :|.:.|.  |.:|.:..|.|.||:|.|.........:|:...|  |:|...:   .|:..|   
Mouse   174 -VRALVLKGASRILQDQHGDTALHVACRRQNLACACCLLEEQPEPGRQLSHPL---DLQLKN--- 231

  Fly   417 WDEKGFAKYYDRACERLE-LNKTLLKNRAHKRDVINASEARGGNPPLFYAVEGEQEHLCYFLLAH 480
            |  :|.|..:....:|.: |.:.||:|.|.    |:..|...|...|..|||.::..|..|||..
Mouse   232 W--QGLACLHIATLQRNQPLIELLLQNGAD----IDVQEGTSGKTALHLAVETQERSLVQFLLQA 290

  Fly   481 LADPDEENLSGHSPKSYHYEYARTLRINLKVARVMEKVISIL 522
            .|..|...|:|.:|            ::|...|.:..:.|.|
Mouse   291 GARVDARMLNGCTP------------LHLAAGRGLNSISSTL 320

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CharonNP_608581.2 ANKYR 290..513 CDD:440430 59/226 (26%)
ANK repeat 301..333 CDD:293786 7/38 (18%)
ANK repeat 335..369 CDD:293786 12/35 (34%)
ANK repeat 371..455 CDD:293786 22/86 (26%)
ANK repeat 457..488 CDD:293786 11/30 (37%)
NfkbieNP_001291885.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..108
ANKYR 121..345 CDD:440430 62/235 (26%)
ANK repeat 122..155 CDD:293786 7/35 (20%)
ANK 1 122..155 7/35 (20%)
ANK 2 157..186 13/36 (36%)
ANK repeat 159..188 CDD:293786 12/36 (33%)
ANK repeat 190..231 CDD:293786 11/43 (26%)
ANK 3 190..219 8/28 (29%)
ANK 4 233..262 9/32 (28%)
ANK repeat 234..264 CDD:293786 9/33 (27%)
ANK repeat 267..298 CDD:293786 11/30 (37%)
ANK 5 267..296 10/28 (36%)
ANK repeat 300..334 CDD:293786 6/33 (18%)
ANK 6 300..329 6/33 (18%)
Blue background indicates that the domain is not in the aligned region.

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