DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tfb4 and Gtf2h3

DIOPT Version :9

Sequence 1:NP_608574.2 Gene:Tfb4 / 33294 FlyBaseID:FBgn0031309 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001019407.1 Gene:Gtf2h3 / 288651 RGDID:1305494 Length:309 Species:Rattus norvegicus


Alignment Length:313 Identity:139/313 - (44%)
Similarity:185/313 - (59%) Gaps:27/313 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEADQAASKEAESCIDLLVIVLDTNP---SQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLA 62
            |.||       |..::||||::||||   .:..::::...|::.::||:...||||.....|:||
  Rat     1 MAAD-------EDELNLLVIIVDTNPIWWGKQALKESQFTLSKCMDAVMVLANAHLFMNRSNQLA 58

  Fly    63 VVSCSHHATNFLYP----------------LPRRQVELRQVDGQYEAFNLVEKTVKQQLGSILMN 111
            |::.....:.||||                ||..... ...||:||......:.:.:::..::..
  Rat    59 VIASHIQESRFLYPGKNGRLGDFFGDPGNALPDCNPS-GSKDGKYELLTAANEVIAEEIKDLMTK 122

  Fly   112 APRLSAPCESLLAGSMSMALCYISRLQRNLAPGVKMHSRILVVTGSNECASQYMTFMNVFFTAQK 176
            :.......|:|||||::.|||||.|..:.:....:|.|||||:..:.:.|.|||.||||.|.|||
  Rat   123 SDIKGQHTETLLAGSLAKALCYIHRASKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQK 187

  Fly   177 LGITIDTCALDKTLSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDY 241
            ..|.||.|.||....||||.||||.|.:|||.|:..|||||||||||....|.:|:||||..|||
  Rat   188 QNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDY 252

  Fly   242 RASCFCHRELIDIGYVCSVCLSVFCKYSPICTTCHTIFKNPGPLPIKGKKKKK 294
            ||:|||||.||:||||||||||:||.:|||||||.|.||...|..:|.||||:
  Rat   253 RAACFCHRSLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAKKKKQ 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tfb4NP_608574.2 Tfb4 15..276 CDD:281798 125/279 (45%)
Gtf2h3NP_001019407.1 tfb4 7..290 CDD:273181 127/283 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345332
Domainoid 1 1.000 244 1.000 Domainoid score I2137
eggNOG 1 0.900 - - E1_COG5242
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1160
Inparanoid 1 1.050 259 1.000 Inparanoid score I3055
OMA 1 1.010 - - QHG56022
OrthoDB 1 1.010 - - D1220881at2759
OrthoFinder 1 1.000 - - FOG0004351
OrthoInspector 1 1.000 - - oto96246
orthoMCL 1 0.900 - - OOG6_103072
Panther 1 1.100 - - LDO PTHR12831
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3069
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

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