DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tfb4 and Gtf2h3

DIOPT Version :10

Sequence 1:NP_608574.2 Gene:Tfb4 / 33294 FlyBaseID:FBgn0031309 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001019407.1 Gene:Gtf2h3 / 288651 RGDID:1305494 Length:309 Species:Rattus norvegicus


Alignment Length:313 Identity:139/313 - (44%)
Similarity:185/313 - (59%) Gaps:27/313 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEADQAASKEAESCIDLLVIVLDTNP---SQHFVRQNPQNLTQILEAVIAFGNAHLMQKAQNKLA 62
            |.||       |..::||||::||||   .:..::::...|::.::||:...||||.....|:||
  Rat     1 MAAD-------EDELNLLVIIVDTNPIWWGKQALKESQFTLSKCMDAVMVLANAHLFMNRSNQLA 58

  Fly    63 VVSCSHHATNFLYP----------------LPRRQVELRQVDGQYEAFNLVEKTVKQQLGSILMN 111
            |::.....:.||||                ||..... ...||:||......:.:.:::..::..
  Rat    59 VIASHIQESRFLYPGKNGRLGDFFGDPGNALPDCNPS-GSKDGKYELLTAANEVIAEEIKDLMTK 122

  Fly   112 APRLSAPCESLLAGSMSMALCYISRLQRNLAPGVKMHSRILVVTGSNECASQYMTFMNVFFTAQK 176
            :.......|:|||||::.|||||.|..:.:....:|.|||||:..:.:.|.|||.||||.|.|||
  Rat   123 SDIKGQHTETLLAGSLAKALCYIHRASKAVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQK 187

  Fly   177 LGITIDTCALDKTLSLLQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDY 241
            ..|.||.|.||....||||.||||.|.:|||.|:..|||||||||||....|.:|:||||..|||
  Rat   188 QNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQLILPPPIHVDY 252

  Fly   242 RASCFCHRELIDIGYVCSVCLSVFCKYSPICTTCHTIFKNPGPLPIKGKKKKK 294
            ||:|||||.||:||||||||||:||.:|||||||.|.||...|..:|.||||:
  Rat   253 RAACFCHRSLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAKKKKQ 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tfb4NP_608574.2 Tfb4 15..276 CDD:461076 125/279 (45%)
Gtf2h3NP_001019407.1 tfb4 7..290 CDD:273181 127/283 (45%)

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