DRSC/TRiP Functional Genomics Resources

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Protein Alignment ds and si:ch73-233f7.1

DIOPT Version :10

Sequence 1:NP_523446.2 Gene:ds / 33245 FlyBaseID:FBgn0284247 Length:3556 Species:Drosophila melanogaster
Sequence 2:NP_001352109.1 Gene:si:ch73-233f7.1 / 100537710 ZFINID:ZDB-GENE-141215-5 Length:1015 Species:Danio rerio


Alignment Length:1039 Identity:269/1039 - (25%)
Similarity:427/1039 - (41%) Gaps:213/1039 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   830 ARYNYYVKEDIPRGTVVGSVIAASG-DVAHRSPVRYSIYSGDPDGYFSIETNSGNIRIAKPLDHE 893
            |:..|.:.|::..|..||::....| |||..|..|:.|.||....|..:...:|.:.:.:.:|.|
Zfish    31 AQIRYSIPEELEHGAFVGNIAEDLGLDVAKLSSRRFRIVSGARKQYLEVNLENGILFVNEKIDRE 95

  Fly   894 ---AKSQV-LLNIQATLGEP-PVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAA 953
               .:|.| .|::|..:..| .:|   :|.:|:.|||||||.|..|...:.:.|||..|:.....
Zfish    96 ELCEQSPVCFLHLQVVIENPLELY---RVEVEILDVNDNAPSFPWSEFNLEITESAAPGSRFPLE 157

  Fly   954 HAHDKDSGSSGQVTYSLVKESGKGLFAID-------ARSGHLILSQHLDYESSQRHTLIVTATDG 1011
            .|.|.|.||:...:|.|   |....|.:|       ::...|:|...||.|..:.|.:::||.||
Zfish   158 SAQDLDVGSNSLRSYLL---SANQHFVLDIQTRNDGSKFAELVLQSQLDREQQKMHEMVLTAVDG 219

  Fly  1012 GVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINAQIIQVNASDLDTGNNARITYRIV 1076
            |.|..|....|.|.|.|.|||.|||::..|.|::.|:......::::||:|||.|.|..|||.. 
Zfish   220 GSPLRSGTAQITVTVLDANDNVPVFDRSVYRVSLVENAPRGTLVLKLNATDLDEGANGEITYSF- 283

  Fly  1077 DAGVDNVTNSISSSDVSQHFGIFPNSGWIYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIV 1141
                    :..:...|.:.|.:..:||.|.::..:|.|....|:|.|.|.|.|..|.....:|:|
Zfish   284 --------SGHAPLKVRELFSVDSHSGEIRVKGIVDYERASVYELYVQAKDKGPSAVAVHCKVLV 340

  Fly  1142 RVLDANDNDPKFQKSKYEFRIEENLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHP--- 1203
            .:||.|||.|:...:.....::|:...|:|:.|::..|.|.|||.|:... :|.|..||:|.   
Zfish   341 DILDVNDNAPEVILTSVSTPVQEDAPPGTVIAVISVMDRDSGENGAVDCQ-IPGNVPFQLHSSFK 404

  Fly  1204 -----VTGEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDV 1263
                 ||.|.     ||||....|::.:.|||.|:|..|.|..:.:.|||:|||.|....|.. .
Zfish   405 NYYTLVTSEF-----LDRESVSEYNITLTARDLGSPPLSTRKTILVQVSDINDNPPRFIQPSY-T 463

  Fly  1264 VSVREEQPPGTEVVRVRAVDRDHGQNASITYSIVKGRDSDGHGL-----FSIDPTSGVIRTRVVL 1323
            |.|.|...||..:..|.|.|.|..|||.::|||::|:.   .|:     .||:..:|.|......
Zfish   464 VYVTENNAPGASICSVTAFDPDSNQNAYLSYSILEGQI---QGMPVSTYVSINSDNGNIYALRSF 525

  Fly  1324 DHEERSIYRLGVAASDGGNPPRETVRMLRVEVLDLNDNRPTFTS------SSLVFRVREDAALGH 1382
            |:|:...:::.|.|.|.|.||..:...:.|.|||.|||.|...|      |.....|......|:
Zfish   526 DYEQLRNFQIRVQAQDAGFPPLSSNVTVNVFVLDQNDNAPVILSPLPRNGSVATEMVPRSVDSGY 590

  Fly  1383 VVGSISPIERPADVVRNSVEESFEDLRVTYTLNPLTKDLIEAAFDIDRHSGNL-VVARLLDREVQ 1446
            :|..|:.::  ||..:||        |::|.:...|.   ...|.:..::|.: .:.|.:|::..
Zfish   591 LVAKITALD--ADAGQNS--------RLSYQVLQATD---PGLFSVALYTGEIRTIRRFVDKDAI 642

  Fly  1447 SEFRLEIRALDTTASNNPQSSAITVKIEVADVNDNAPEWPQDPIDLQVSEATPVGTIIHNFTATD 1511
            .: ||.|...|   :..|..|| ||.| :..|.|:.||...|..||.:|...|....::...:. 
Zfish   643 RQ-RLVILVKD---NGQPPLSA-TVSI-ILSVVDSVPESLSDFGDLSLSPQPPSNLALYLIVSL- 700

  Fly  1512 ADTGTNGDLQYRLIRYFPQLNESQEQAMSLFRMDSLTGALSLQAPLDFEAVQEYLLIVQALD--- 1573
                                     ..:||..:.::....:::...|.:::..|.|  .:|.   
Zfish   701 -------------------------STVSLIFLVAIIVLAAVKCYKDRDSLGGYAL--SSLSTAC 738

  Fly  1574 ------------QSSNVTERLQTSVTVRLRILDANDHAPH---------------------FVSP 1605
                        :.||:..::.|...|....::.|.:|.:                     |:.|
Zfish   739 CSFEPEPPAEVFKKSNLNLQISTGAKVPTNCMEVNSNAGNLSQAYCYKVCLTPESAKSDFMFLKP 803

  Fly  1606 -------NSSGGKTASLFISDATRIGEVVAHIVAVDEDSGDNGQLT-YEITGGNGEGRFRINSQT 1662
                   |::.....:|.:|..:|...|            :||..| .|:...|.:.....| ||
Zfish   804 CSPGTPRNNAARGADNLALSSQSRCSSV------------NNGATTPNELKQANTDWALTKN-QT 855

  Fly  1663 GIIE----------LVKSLPPATEDVEKGGRFNLIIG--------AKD----------------- 1692
            ..::          ||:....|..:...|   .:..|        :|:                 
Zfish   856 SSVKSCNSINMDGTLVRKAMQAEPEHYMG---QMAAGQYWTWGTRSKEYRNQSPAGGVSQRAWTP 917

  Fly  1693 HGQPEPKKSSLNLHL--------IVQGSHNNPPRFLQAVYRATILENVPSGSFVLQVTAKS-LH 1747
            |..|:...:....||        ..|...|.||.:...||    :...|||...|:.:.:| ||
Zfish   918 HYTPQHNPTQNQHHLQQQQQQQATAQSHPNPPPDYQHNVY----IPGTPSGFCTLRPSHRSELH 977

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsNP_523446.2 CA 111..172 CDD:214520
Cadherin_repeat 178..282 CDD:206637
Cadherin_repeat 291..389 CDD:206637
Cadherin_repeat 406..500 CDD:206637
Cadherin_repeat 509..607 CDD:206637
Cadherin_repeat 616..711 CDD:206637
Cadherin_repeat 719..820 CDD:206637
Cadherin_repeat 832..927 CDD:206637 29/100 (29%)
Cadherin_repeat 937..1032 CDD:206637 32/101 (32%)
Cadherin_repeat 1040..1149 CDD:206637 32/108 (30%)
Cadherin_repeat 1158..1252 CDD:206637 34/101 (34%)
Cadherin_repeat 1263..1361 CDD:206637 34/102 (33%)
Cadherin_repeat 1369..1481 CDD:206637 26/112 (23%)
Cadherin_repeat 1489..1598 CDD:206637 15/123 (12%)
Cadherin_repeat 1614..1710 CDD:206637 22/139 (16%)
Cadherin_repeat 1723..1843 CDD:206637 9/26 (35%)
Cadherin_repeat 1853..1948 CDD:206637
Cadherin_repeat 1957..2053 CDD:206637
Cadherin_repeat 2061..2154 CDD:206637
CA_like 2171..>2232 CDD:481204
Cadherin_repeat 2326..2424 CDD:206637
Cadherin_repeat 2434..2528 CDD:206637
Cadherin_repeat 2549..2641 CDD:206637
Cadherin_repeat 2652..2748 CDD:206637
Cadherin_repeat 2758..2858 CDD:206637
Cadherin_repeat 2866..2960 CDD:206637
Cadherin_repeat 2985..3071 CDD:206637
si:ch73-233f7.1NP_001352109.1 Cadherin_2 32..114 CDD:462413 22/81 (27%)
Cadherin_repeat 139..240 CDD:206637 32/103 (31%)
Cadherin_repeat 248..348 CDD:206637 32/108 (30%)
Cadherin_repeat 361..453 CDD:206637 34/97 (35%)
Cadherin_repeat 461..563 CDD:206637 34/105 (32%)
Cadherin_repeat 582..670 CDD:206637 26/106 (25%)
Cadherin_C_2 691..802 CDD:465139 13/138 (9%)
Cadherin_tail 842..988 CDD:435046 27/144 (19%)
Blue background indicates that the domain is not in the aligned region.

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