DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gsc and YHP1

DIOPT Version :10

Sequence 1:NP_001137762.2 Gene:Gsc / 33240 FlyBaseID:FBgn0010323 Length:473 Species:Drosophila melanogaster
Sequence 2:NP_010739.3 Gene:YHP1 / 852062 SGDID:S000002859 Length:353 Species:Saccharomyces cerevisiae


Alignment Length:129 Identity:31/129 - (24%)
Similarity:55/129 - (42%) Gaps:35/129 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   339 RKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKREEQ 403
            |::|.||  :..:|..|:..||:...|:...|.:|:.:.::.|:.|::||:|:|...:|.|    
Yeast   174 RRKRRRT--SSYELGILQTAFDECPTPNKAKRIELSEQCNMSEKSVQIWFQNKRQAAKKHK---- 232

  Fly   404 ERLRKLQEEQCGSTTNGTTNSSSGTTSST---GNGSLTVKCPGSDHYSAQLVHIKSDPNGYSDA 464
                                 :||.||..   .|.|:::     ..||...:.|.|.|....:|
Yeast   233 ---------------------NSGNTSHCKVHSNDSMSM-----ISYSDAALEITSTPTSTKEA 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GscNP_001137762.2 Homeodomain 341..397 CDD:459649 16/55 (29%)
YHP1NP_010739.3 COG5576 123..278 CDD:227863 31/129 (24%)

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