Protein Alignment Gsc and gsc

DIOPT Version :10

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001016704.1
• Gene: gsc / 549458
• XenbaseID: XB-GENE-486771
• Length: 243
• Species: Xenopus tropicalis
• Alignment Length: 228
• Identity: 84/228 - (36%)
• Similarity: 108/228 - (47%)
• Gaps: 27/228 - (11%)

  Fly   227 SPIRPQRVPAMLQHPGLHLGHLAAAAASGF---AASPSDFLVA-------YPNFYPNYMH----- 276
            |.:.||..|.:....|..|  ...|..|||   |.:|:..|.|       :.|:|...:|
 Frog    21 SVLLPQNGPMVFSSLGESL--YGPADYSGFYNRAVAPTSTLQAVTGSRLGFNNYYYGQLHVQTPM 83

  Fly   277 ----AAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPPP 337
                ..||..:...|........|...:|....|..||....:.::|.....:..|.:..|   .
 Frog    84 GPSCCGAVQSLGTQQCSCVPPATAYDGAGSVLMPPVPHQMLPYMNVGTLSRTELQLLNQLH---C 145

  Fly   338 KRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKR-- 400
            :||||||||||:||||.||..|.:|.||||..|||||.:|.|:||:|||||||||||||:|||
 Frog   146 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRRQKRSS 210

  Fly   401 -EEQERLRKLQEEQCGSTTNGTTNSSSGTTSST 432
             ||.|..:|..:....||..|.....|...|.:
 Frog   211 SEESENTQKWNKSSKNSTEKGDEQVKSDLDSDS 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	41/55 (75%)
gsc	NP_001016704.1	Homeodomain	149..205	CDD:459649	41/55 (75%)