Protein Alignment Gsc and gsc

DIOPT Version :9

• Sequence 1: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Sequence 2: NP_001016704.1
• Gene: gsc / 549458
• XenbaseID: XB-GENE-486771
• Length: 243
• Species: Xenopus tropicalis
• Alignment Length: 228
• Identity: 84/228 - (36%)
• Similarity: 108/228 - (47%)
• Gaps: 27/228 - (11%)

  Fly   227 SPIRPQRVPAMLQHPGLHLGHLAAAAASGF---AASPSDFLVA-------YPNFYPNYMH----- 276
            |.:.||..|.:....|..|  ...|..|||   |.:|:..|.|       :.|:|...:|
 Frog    21 SVLLPQNGPMVFSSLGESL--YGPADYSGFYNRAVAPTSTLQAVTGSRLGFNNYYYGQLHVQTPM 83

  Fly   277 ----AAAVAHVAAAQMQAHVSGAAAGLSGHGHHPHHPHGHPHHPHLGAHHHGQHHLSHLGHGPPP 337
                ..||..:...|........|...:|....|..||....:.::|.....:..|.:..|   .
 Frog    84 GPSCCGAVQSLGTQQCSCVPPATAYDGAGSVLMPPVPHQMLPYMNVGTLSRTELQLLNQLH---C 145

  Fly   338 KRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVDLKEERVEVWFKNRRAKWRKQKR-- 400
            :||||||||||:||||.||..|.:|.||||..|||||.:|.|:||:|||||||||||||:|||
 Frog   146 RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARRVHLREEKVEVWFKNRRAKWRRQKRSS 210

  Fly   401 -EEQERLRKLQEEQCGSTTNGTTNSSSGTTSST 432
             ||.|..:|..:....||..|.....|...|.:
 Frog   211 SEESENTQKWNKSSKNSTEKGDEQVKSDLDSDS 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Gsc	NP_001137762.2	Homeobox	343..396	CDD:278475	38/52 (73%)
gsc	NP_001016704.1	Homeobox	151..204	CDD:278475	38/52 (73%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000011
OrthoInspector	1	1.000	-	-		oto103604
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R6207
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	3.030